Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_014902.1 Length=2727 Score E Sequences producing significant alignments: (Bits) Value seq16 84.2 4e-13 >seq16 Length=188620566 Score = 84.2 bits (92), Expect = 4e-13 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 1739 GGCTTTCCGTATTTG-ACGTTACTTTGCCAGTCACGTTGTGCGCCCATGAATTCTTTGAA 1797 || |||| ||| ||| || || ||| ||||||| | |||||| || | ||||| || | Sbjct 2249319 GGTTTTCTGTACTTGCACTTTGCTT-GCCAGTCTCTTTGTGCACCAAGTAATTCCTTCCA 2249261 Query 1798 ATGTTTCAAATAATGCGGATCGACGTCATCAATGACGTTATA--CCATGCATCGTTGGAA 1855 ||||| ||| | || || | |||| |||||| |||||||| ||| ||||||| || Sbjct 2249260 GTGTTTTAAACATTGTGGGTTAACGTTATCAATAACGTTATATTCCA--CATCGTTAGAG 2249203 Query 1856 TACACTTTCGGACTAAGGTCCAAATGGCCGCAGAGATAATTGTGCGGCCCCAATGCACGA 1915 | || | ||| | | ||| |||| || | | |||||| || ||||||| | Sbjct 2249202 AAAACCGTAGGATTCAAGTCTAAATAACCACTTAAATAATTATGTCTTCCCAATGATCTT 2249143 Query 1916 GCCCATGTCGTCTTCCCAGTACGACTATCACCTTCAAT 1953 ||||| | ||||| || || | |||||||||||| Sbjct 2249142 GCCCACATTGTCTTTCCGGTTCTTGAATCACCTTCAAT 2249105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8617460093264