Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_022586.1 Length=2786 Score E Sequences producing significant alignments: (Bits) Value seq11 78.8 2e-11 >seq11 Length=168460249 Score = 78.8 bits (86), Expect = 2e-11 Identities = 205/305 (67%), Gaps = 12/305 (4%) Strand=Plus/Minus Query 1718 CCTGGATTGCAAAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTAC 1777 ||||| ||||| || | ||| || || || || ||||| | || |||||| ||||| Sbjct 165527603 CCTGGGTTGCATAGCATGATTGTTGGTATGCCTCCTTTGAAAAGACTTGGCTTGCCGTAT 165527544 Query 1778 TTTGTGTTGGATTGCCAGTCCTTC--TGGGCCCCAATGAATTCCTTAAAGTGCTTTAGGT 1835 || || || ||||| | ||| || || ||||| || || || ||||| | | || Sbjct 165527543 TTGCAGTAAGACTGCCAAT--TTCGTTGAGCTCCAATAAACTCTTTCCAGTGCATGAAGT 165527486 Query 1836 ATTGGGGGTCGACGTCATCAATGACGTTGTACCAAGCACTATTACTGTACACTCTTGGAT 1895 |||| || | |||||| |||| |||||| ||| | || | | ||| || | Sbjct 165527485 ATTGTGGTGGTATGTCATCGATGATGTTGTAGTCAGCGTTGTTTGAGAAGACTTTTTTGT 165527426 Query 1896 TCAGGTCCAAGTGCCCACATAGATAATTATGTGGACCTAAAGACCGAGCCCAAACTGTTT 1955 | |||||| || ||||||| || |||||| || ||||| | ||||| | ||||| Sbjct 165527425 TGTGGTCCATATGACCACATATGTAGTTATGTCTTCCCAAAGATCTTGCCCACATTGTTT 165527366 Query 1956 TACCTATCCT--ACTTGGCCCTTCTATTACAAT--ACTAATGGGCCTATCCGGCCGCGCA 2011 | | | |||| | || |||| ||| | | ||| ||| | ||| ||||||||| Sbjct 165527365 TGCTTGTCCTGGAATTA--CCTTTTATGATTGTTGACTT-TGGTCTCATC-GGCCGCGCA 165527310 Query 2012 GCGGC 2016 ||||| Sbjct 165527309 GCGGC 165527305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8803052876520