Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_030699.1 Length=2759 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 6e-17 >seq16 Length=188620566 Score = 96.9 bits (106), Expect = 6e-17 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 1722 CTTTAATTTGAATTGGTTTCCCGTATTTTGTGTT-GCTCTGCCAGTCTCTTTGGGCCCCC 1780 |||| || |||| ||||| | ||| || || ||| |||||||||||||| || || Sbjct 2249333 CTTTGATCTGAACCGGTTTTCTGTACTTGCACTTTGCT-TGCCAGTCTCTTTGTGCACCA 2249275 Query 1781 ATGAATTCTTTAAAGTGCTTTAGATAATGCGGGTCTACGTCATCAACCACGTTATACCAC 1840 | ||||| || |||| |||| | | || |||| |||| ||||| |||||||| | Sbjct 2249274 AGTAATTCCTTCCAGTGTTTTAAACATTGTGGGTTAACGTTATCAATAACGTTATATTCC 2249215 Query 1841 GCATCATTGCTGTATACCTTTGGACTCAAATCTAGGTGTCCACATAGGTAATTATGGGGC 1900 |||| || | | ||| | ||| |||| |||| | |||| || |||||||| Sbjct 2249214 ACATCGTTAGAGAAAACCGTAGGATTCAAGTCTAAATAACCACTTAAATAATTATGTCTT 2249155 Query 1901 CCTAATGACCTGGCCCACATGGTCTTCCCTGT 1932 || ||||| || |||||||| ||||| || || Sbjct 2249154 CCCAATGATCTTGCCCACATTGTCTTTCCGGT 2249123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8719858430800