Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_008283.1 Length=2750 Score E Sequences producing significant alignments: (Bits) Value seq3069 84.2 4e-13 >seq3069 Length=10854949 Score = 84.2 bits (92), Expect = 4e-13 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 1297 GCTTTCCTCAAGTTGTGGTTGAATTGGATTTGCACTTCCATGTAGTCCATGTCGGTGTTG 1356 |||||||| | |||| ||||||||| || || | || ||| ||| |||| |||| Sbjct 3754405 GCTTTCCTGAGGTTGAAGTTGAATTGTATCTGGATCTCTATGATGTCGTGGTCGTTGTTA 3754464 Query 1357 AACGGTCTGGTGCTGTGCCTCAGCACCTTGAAATAGAGGGGATTTGGAACCTTCCAAATA 1416 || ||||| | ||| | | ||||||||| ||||||||||| || | |||||| Sbjct 3754465 AATGGTCTCCTCTGGTGTCATGTTAACTTGAAATATAGGGGATTTGGTACTTCTCAAATA 3754524 Query 1417 TAGACGCCATTCTGCGCCTGAGCTGCAGTGATGTACTCCCCTGTGCGAAAATCCAT 1472 || ||| |||| | || ||| | ||||| | | ||| |||||||||| ||| Sbjct 3754525 TATACGTCATTGTTGCACTAAGCCGTAGTGAGATTTTTCCCAGTGCGAAAATACAT 3754580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8690884368208