Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_030700.1 Length=2837 Score E Sequences producing significant alignments: (Bits) Value seq1694 102 1e-18 >seq1694 Length=789422 Score = 102 bits (112), Expect = 1e-18 Identities = 122/164 (74%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 2290 GTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGACCTGGAATTCACCCCAGTCGATGAAA 2349 || |||| || || ||||||||||| || |||| || || |||||||| || | | | Sbjct 599272 GTTTGCTTACATCTCCTAGCAGATCTTCCATCGATTTGAAAATCACCCCAATCTACGTAG 599213 Query 2350 TCTCCGTCCTTCTCGATGTATGACTTGACATCTGAGGAGGACTTTGCTGCCTGGAAATTT 2409 ||||| ||||| || |||||||| || |||| |||| || |||| | ||| | | || Sbjct 599212 TCTCCCTCCTTTTCAATGTATGATTTAACATTAGAGGCTGATTTTGTAGACTGAACACTT 599153 Query 2410 GGATGGAATTGGGAGGAGTTGTGT--GGATGTTGTAGGTCGAAA 2451 |||||||||| || |||| ||| || ||| ||| ||||||| Sbjct 599152 GGATGGAATT--GAATAGTTCTGTTAGGGTGTGGTATGTCGAAA 599111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8966064796740