Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_003865.1 Length=2663 Score E Sequences producing significant alignments: (Bits) Value seq9745 156 7e-35 >seq9745 Length=7305 Score = 156 bits (172), Expect = 7e-35 Identities = 251/361 (70%), Gaps = 6/361 (2%) Strand=Plus/Minus Query 1494 GCATTTTTGAGTGTCCACTCTCTAAGTGCTGCATTTTCAGCTTTGTCGAGGAAATCTTTA 1553 |||||| |||| | ||| ||| ||||| || | | ||| ||| || || |||||| Sbjct 6848 GCATTTATGAGAGCCCAGGACTTAATAGCTGCGTTCTTATCTTCGTCAAGAAACTCTTTA 6789 Query 1554 TAGCTGGCCCCCTCTCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGA 1613 || || | ||| |||||||| || | ||||| || || |||||||||| || | Sbjct 6788 TAACTTGAGTTGGGTCCTGGATTGCAAAGGAAGATTGTGGGCATCCCGCCTTTAACTTAA 6729 Query 1614 ACTGACTTTCCATATTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTC 1673 | | |||||| ||| | | || ||||||| || || | |||||| || ||||| || Sbjct 6728 AAGGGCTTTCCGTATCTTCTATTATACTGCCAATCACTTTTGGCCCCCATGAATTCCTTA 6669 Query 1674 CAGTGCGTTAGCTTTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCA 1733 | || ||||||||| ||||| | |||| |||||||||||| ||| | | ||| Sbjct 6668 AAATGT------TTTAAATAACGCGGATCAACGTTATCAATGACGTTGTACCAGGCATCA 6615 Query 1734 TTTGAGAACACCCTAGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAA 1793 || | || | | | | ||| |||||| | | || || ||||||||||| Sbjct 6614 TTGTTGTACGTTTTTGGGCTTATATCATAATGACCGCATAAGTAATTGTGTGGGCCTAAT 6555 Query 1794 GCACGAGCCCACATTGTTTTGCCAGTTCTAGAATCACCTTCGACTATTACACTAATAGGT 1853 | | |||||| |||||||| |||||||||| |||||||| || | || ||| |||||| Sbjct 6554 GATCTAGCCCATATTGTTTTCCCAGTTCTAGCCTCACCTTCTACAACTATACTCATAGGT 6495 Query 1854 C 1854 | Sbjct 6494 C 6494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8334488031540