Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_003866.1 Length=2583 Score E Sequences producing significant alignments: (Bits) Value seq9745 104 4e-19 >seq9745 Length=7305 Score = 104 bits (114), Expect = 4e-19 Identities = 211/311 (68%), Gaps = 8/311 (3%) Strand=Plus/Minus Query 1696 TCCTGGATTGCACAGCACGATTGAGGGTATGCCACCTTTAATTTGAACTGGCTTGCCGTA 1755 |||||||||||| || | ||||| ||| || || ||||||| || || ||||| ||||| Sbjct 6774 TCCTGGATTGCAAAGGAAGATTGTGGGCATCCCGCCTTTAACTTAAAAGGGCTTTCCGTA 6715 Query 1756 CTTACAGTTTGATTGCCAGTCCCTTTGGGCCCCAATAAGCTCTTTCCAGTGCTTTAGCTT 1815 | | || | ||||| || |||| |||||| || | || || | | | || Sbjct 6714 TCTTCTATTATACTGCCAATCACTTTTGGCCCCCATGAATTCCTTAAAAT------GTTT 6661 Query 1816 TAGATAATGCGGAGCTATGTCATCAATGACGTTATACTCCGCATTATT-TGAAAAGACCT 1874 || |||| ||||| | | || |||||||||||| ||| |||| ||| | | | | Sbjct 6660 TAAATAACGCGGATCAACGTTATCAATGACGTTGTACCAGGCATCATTGTTGTACGTTTT 6601 Query 1875 TTGAATTAAAGTCGAGGTGCCCACTCAAATAATTATGTGGTCCTAAAGCACGCGCCCACA 1934 | | ||| | || || || | || ||||| ||||| ||||| | | ||||| | Sbjct 6600 TGGGCTTATA-TCATAATGACCGCATAAGTAATTGTGTGGGCCTAATGATCTAGCCCATA 6542 Query 1935 TGGTCTTGCCGGTTCGTGAATCACCTTCAACTATGATACTAATAGGTCTTTCCGCCCGCG 1994 | || || || |||| | |||||||| || | ||||| ||||||| | | || | Sbjct 6541 TTGTTTTCCCAGTTCTAGCCTCACCTTCTACAACTATACTCATAGGTCGGTGAGGCCTCC 6482 Query 1995 CAGCGGCACTC 2005 ||| ||||||| Sbjct 6481 CAGAGGCACTC 6471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8080871050740