Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_004732.1 Length=2662 Score E Sequences producing significant alignments: (Bits) Value seq9745 149 1e-32 >seq9745 Length=7305 Score = 149 bits (164), Expect = 1e-32 Identities = 233/334 (70%), Gaps = 6/334 (2%) Strand=Plus/Minus Query 1522 GCTGCATTTTCAGCTTTGTCGAGAAACTCTTTATAGCTGGCCCCCTCTCCGGGATTGCAA 1581 ||||| || | | ||| ||| |||||||||||||| || | ||| ||||||||| Sbjct 6821 GCTGCGTTCTTATCTTCGTCAAGAAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAA 6762 Query 1582 AGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATATTTACAGTTGGAC 1641 || | |||| || || || ||||||| || || |||||||| ||| | | || || Sbjct 6761 AGGAAGATTGTGGGCATCCCGCCTTTAACTTAAAAGGGCTTTCCGTATCTTCTATTATAC 6702 Query 1642 TGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAAATAATGCGGA 1701 ||||| || |||| |||||| || ||||| || | | | ||||||||| ||||| Sbjct 6701 TGCCAATCACTTTTGGCCCCCATGAATTCCTTAAAAT------GTTTTAAATAACGCGGA 6648 Query 1702 GCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCCTAGAATTGAAATCA 1761 | |||| |||||||||||| ||| | | ||||| | | | | | | |||| Sbjct 6647 TCAACGTTATCAATGACGTTGTACCAGGCATCATTGTTGTACGTTTTTGGGCTTATATCA 6588 Query 1762 AGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACATTGTTTTGCCCGTT 1821 || || | || || || ||||||||||| || | |||||| |||||||| || ||| Sbjct 6587 TAATGACCGCATAAGTAATTGTGTGGGCCTAATGATCTAGCCCATATTGTTTTCCCAGTT 6528 Query 1822 CGAGAATCACCCTCAATTATTACACTAATAGGTC 1855 | || ||||| || | | || ||| ||||||| Sbjct 6527 CTAGCCTCACCTTCTACAACTATACTCATAGGTC 6494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8331317819280