Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_008304.1 Length=2613 Score E Sequences producing significant alignments: (Bits) Value seq9745 120 5e-24 >seq9745 Length=7305 Score = 120 bits (132), Expect = 5e-24 Identities = 211/308 (69%), Gaps = 6/308 (2%) Strand=Plus/Minus Query 1560 TCCTGGATTGCACAGCACGATTGATGGGATACCTCCTTTAATTTGAACCGGCTTTCCATA 1619 |||||||||||| || | ||||| || || || ||||||| || || |||||||| || Sbjct 6774 TCCTGGATTGCAAAGGAAGATTGTGGGCATCCCGCCTTTAACTTAAAAGGGCTTTCCGTA 6715 Query 1620 TTTACAGTTGGACTGCCAGTCCTTTTGGGCCCCAATCAATTCCTTCCAGTGCTTTAGCTT 1679 | | | || ||||||| || ||| |||||| || |||||||| | | | || Sbjct 6714 TCTTCTATTATACTGCCAATCACTTTTGGCCCCCATGAATTCCTTAAAAT------GTTT 6661 Query 1680 TAAGTATTGCGGATTGACATCATCTATGACGTTATACTCCACTTGATTGGAGTATACCCT 1739 ||| || |||||| || | ||| |||||||| ||| | | |||| ||| | Sbjct 6660 TAAATAACGCGGATCAACGTTATCAATGACGTTGTACCAGGCATCATTGTTGTACGTTTT 6601 Query 1740 AGAATTGAAATCAAGATGACCGCTCAGATAATTATGTGGGCCTAAAGCACGAGCCCACAT 1799 | | | |||| |||||||| | ||||| ||||||||||| | | |||||| || Sbjct 6600 TGGGCTTATATCATAATGACCGCATAAGTAATTGTGTGGGCCTAATGATCTAGCCCATAT 6541 Query 1800 TGTCTTGCCCGTTCGTGAATCCCCTTCGACTATCAAACTAATCGGTCTCTCTGGCCGCGC 1859 ||| || || |||| | || ||||| || | | ||| || |||| | |||| | | Sbjct 6540 TGTTTTCCCAGTTCTAGCCTCACCTTCTACAACTATACTCATAGGTCGGTGAGGCCTCCC 6481 Query 1860 AGCGGCAC 1867 || ||||| Sbjct 6480 AGAGGCAC 6473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8175977418540