Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_012481.1 Length=2597 Score E Sequences producing significant alignments: (Bits) Value seq9745 109 9e-21 >seq9745 Length=7305 Score = 109 bits (120), Expect = 9e-21 Identities = 212/311 (68%), Gaps = 8/311 (3%) Strand=Plus/Minus Query 1533 TCCTGGATTGCACAGCACGATTGATGGTATGCCACCTTTAATTTGAACTGGCTTGCCGTA 1592 |||||||||||| || | ||||| || || || ||||||| || || ||||| ||||| Sbjct 6774 TCCTGGATTGCAAAGGAAGATTGTGGGCATCCCGCCTTTAACTTAAAAGGGCTTTCCGTA 6715 Query 1593 CTTACAGTTTGATTGCCAGTCCCTTTGGGCCCCTATGAGCTCTTTCCAGTGCTTTAGCTT 1652 | | || | ||||| || |||| |||||| |||| || || | | | || Sbjct 6714 TCTTCTATTATACTGCCAATCACTTTTGGCCCCCATGAATTCCTTAAAAT------GTTT 6661 Query 1653 TAAATAATGCGGAGCTATGTCATCAATGACGTTATACTCCACATCATTCGAG-AAGACCT 1711 ||||||| ||||| | | || |||||||||||| ||| ||||||| | | | | Sbjct 6660 TAAATAACGCGGATCAACGTTATCAATGACGTTGTACCAGGCATCATTGTTGTACGTTTT 6601 Query 1712 TGGAATTGAAGTCGAGGTGACCACTCAAATAATTATGTGGGCCTAAAGCACGTGCCCACA 1771 ||| || | || ||||| | || ||||| ||||||||||| | | ||||| | Sbjct 6600 TGGGCTT-ATATCATAATGACCGCATAAGTAATTGTGTGGGCCTAATGATCTAGCCCATA 6542 Query 1772 TGGTTTTGCCTGTTCGTGAACCTCCTTCAATTATGATACTAATAGGTCTCTCCGGCCGCG 1831 | ||||| || |||| | | ||||| | | ||||| ||||||| | |||| | Sbjct 6541 TTGTTTTCCCAGTTCTAGCCTCACCTTCTACAACTATACTCATAGGTCGGTGAGGCCTCC 6482 Query 1832 CAGCGGAACTC 1842 ||| || |||| Sbjct 6481 CAGAGGCACTC 6471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8125254022380