Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_021579.1 Length=2669 Score E Sequences producing significant alignments: (Bits) Value seq9745 123 4e-25 >seq9745 Length=7305 Score = 123 bits (136), Expect = 4e-25 Identities = 185/261 (71%), Gaps = 10/261 (4%) Strand=Plus/Minus Query 1494 TGAGGAAGACGAATTTTGCATTGTGGAGAGTCCAGTTCTTGAGTGACAGATTCTCCTCTT 1553 ||||||| |||| |||||| ||||| |||| ||| | | |||| |||| Sbjct 6865 TGAGGAATGCGAAGACTGCATTTATGAGAGCCCAGGACTTAATAGCTGCGTTCTTATCTT 6806 Query 1554 TGTCGAGGAACTCTTTATAACTGGACCCCTCGCCTGGATTGCAAAGCACGATTGAGGGTA 1613 ||| || |||||||||||||| || |||||||||||||| | ||||| ||| | Sbjct 6805 CGTCAAGAAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAAAGGAAGATTGTGGGCA 6746 Query 1614 TGCCGCCTTTAATTTGAACCGGCTTTCCGTATTTGCAATTTGATTGCCAGTCCCTTTGGG 1673 | |||||||||| || || |||||||||||| | | ||| | ||||| || |||| || Sbjct 6745 TCCCGCCTTTAACTTAAAAGGGCTTTCCGTATCTTCTATTATACTGCCAATCACTTTTGG 6686 Query 1674 CCCCAATCAATTCTTTCCAGTGCTTCATCTTTAGGTAGTGCGGTGCGACGTCATCAATGA 1733 |||| || ||||| || | || |||| || |||| | |||| |||||||| Sbjct 6685 CCCCCATGAATTCCTTAAAATG------TTTTAAATAACGCGGATCAACGTTATCAATGA 6632 Query 1734 CGTTATAATCCA--CATCATT 1752 |||| || ||| ||||||| Sbjct 6631 CGTTGTA--CCAGGCATCATT 6613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8353509305100