Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_001998.1 Length=4529 Score E Sequences producing significant alignments: (Bits) Value seq3044 125 2e-25 >seq3044 Length=1521 Score = 125 bits (138), Expect = 2e-25 Identities = 285/426 (67%), Gaps = 12/426 (3%) Strand=Plus/Plus Query 233 TTCTTTTGATAGATCTTGTGGTTTAAAGACTACATTCGACGCCGGTTACCTAATCCCTAT 292 |||||||||| | || ||||| |||||||| || | ||||| || | || | Sbjct 847 TTCTTTTGATCGTACTCATGGTTACAAGACTACTTTTTCGTCAGGTTATCTTGTTCCAGT 906 Query 293 CTTTTGTGATGAAGTTCTCCCTGGAGATACTTT----CTCC--TTGAAAGAGGCGTTTTT 346 ||||||||||| | ||| || || || ||||| ||| |||| || ||||| | Sbjct 907 TTTTTGTGATGAGGCTCTTCCCGGCGACACTTTTACGCTCGATTTGACAG---CGTTTGT 963 Query 347 AGCACGTATGGCAACGCCTATCTTTCCTCTTATGGATAATTTGCGTTTAGATACGCAGTA 406 |||||||| |||||||| | ||| |||||||||| || |||||| || || | Sbjct 964 T---CGTATGGCTACGCCTATTTATCCCGTTATGGATAACTTATATTTAGACACTCACTT 1020 Query 407 TTTCTTTGTTCCTCTTCGACTGTTATGGTCGAATTTCCAAAAGTTCTGTGGAGAACAAGA 466 ||||||||||||| ||| || | ||| |||| || || || | ||||| Sbjct 1021 TTTCTTTGTTCCTTATCGTTTGCTCTGGAATAATTGGGAACGTTTTAACGGTGCTCAAGA 1080 Query 467 TAATCCTGGAGATTCCACAGATTTTCTTACCCCAGTTTTAACCGCTCCTAGTGGGGGATT 526 |||||||| | ||| || |||| |||| || | || ||||||| ||| || | Sbjct 1081 CAATCCTGGTGCTTCAACCGATTATCTTGTTCCTAAAATTACTGCTCCTACTGGTGGCTA 1140 Query 527 TATTGAAGGATCAATCCATGATTATCTTGGTCTACCTACTAAAGTTGCAGGAATTGAATG 586 | | || || | |||| ||| ||||||| ||||| |||||||| || |||| Sbjct 1141 TTCTACTGGGTCTCTTTATGACTATTTTGGTCTTCCTACGAAAGTTGCTGGTTTTGATCA 1200 Query 587 TGTTGCGTTCTGGCACAGAGCTTACAATCTGATTTGGAACCAGTACTATCGTGATGAGAA 646 | || || || |||||||||| || |||| ||| | | | ||||| || || Sbjct 1201 TTCGGCTTTGCCGCTTCGAGCTTACAACCTCATTTACAACGAATGGTTCCGTGACGAAAA 1260 Query 647 TATTCA 652 | |||| Sbjct 1261 TCTTCA 1266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14380233284130