Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_007461.1 Length=4530 Score E Sequences producing significant alignments: (Bits) Value seq3044 118 3e-23 >seq3044 Length=1521 Score = 118 bits (130), Expect = 3e-23 Identities = 366/561 (65%), Gaps = 24/561 (4%) Strand=Plus/Plus Query 78 TTCTTTTGATAGATCTTGTGGTTTAAAAACTACATTCGACGCCGGTTACCTAATCCCTAT 137 |||||||||| | || ||||| || ||||| || | ||||| || | || | Sbjct 847 TTCTTTTGATCGTACTCATGGTTACAAGACTACTTTTTCGTCAGGTTATCTTGTTCCAGT 906 Query 138 CTTTTGTGATGAAGTTCTCCCTGGAGATACTTT----CTCC--TTGAAAGAGGCGTTTTT 191 ||||||||||| | ||| || || || ||||| ||| |||| || ||||| | Sbjct 907 TTTTTGTGATGAGGCTCTTCCCGGCGACACTTTTACGCTCGATTTGACAG---CGTTTGT 963 Query 192 AGCACGTATGGCAACGCCTATCTTTCCTCTTATGGATAATTTGCGTTTAGATACGCAGTA 251 |||||||| |||||||| | ||| |||||||||| || |||||| || || | Sbjct 964 T---CGTATGGCTACGCCTATTTATCCCGTTATGGATAACTTATATTTAGACACTCACTT 1020 Query 252 TTTCTTTGTTCCTCTTCGACTATTATGGTCGAATTTTCAAAAGTTCTGTGGAGAACAAGA 311 ||||||||||||| ||| | | ||| |||| || || || | ||||| Sbjct 1021 TTTCTTTGTTCCTTATCGTTTGCTCTGGAATAATTGGGAACGTTTTAACGGTGCTCAAGA 1080 Query 312 TGATCCTGGAGATTCTACAGATTTTCTTACCCCAATTTTGACCGCTCCTCAGAATGGTGG 371 ||||||| | ||| || |||| |||| || | | || |||||| | |||||| Sbjct 1081 CAATCCTGGTGCTTCAACCGATTATCTTGTTCCTAAAATTACTGCTCCT---ACTGGTGG 1137 Query 372 TTTTGCTGAAGGATCGATCCATGATTATCTTGGTCTACCTACTAAAGTTGCAGGAGTTCA 431 | | || || || | |||| ||| ||||||| ||||| |||||||| || || | Sbjct 1138 CTATTCTACTGGGTCTCTTTATGACTATTTTGGTCTTCCTACGAAAGTTGCTGGTTTTGA 1197 Query 432 ATGTGTTGCGTTTTGGCACAGAGCTTACAATTTGATTTGGAACCAGTACTATCGTGATGA 491 | || || || |||||||||| | |||| ||| | | | ||||| || Sbjct 1198 TCATTCGGCTTTGCCGCTTCGAGCTTACAACCTCATTTACAACGAATGGTTCCGTGACGA 1257 Query 492 AAATATTCAGGATTCAGTTGAAGTGCAAA---TGGGAGATACCACTGCAGATGAAGTGAA 548 |||| |||| |||| || || ||| | || ||| | | ||||| Sbjct 1258 AAATCTTCAAAATTCGGT---CTTGGAAAACGTTGGTGAT---GGTCCTGATGATCCTGC 1311 Query 549 CAATTATAAGCTTCTTAAGCGCGGGAAGCGTTATGATTATTTCACTTCATGTCTCCCTTG 608 |||| ||| ||| ||||| || || | |||||||| ||||| | | ||||| Sbjct 1312 TAATTTCGTGCTCCTTCGTCGCGGTAAACGCCACGATTATTTTACTTCTGCTTTACCTTG 1371 Query 609 GCCACAAAAAGGTCCTGCAGT 629 ||| ||||| ||||| ||||| Sbjct 1372 GCCTCAAAAGGGTCCGGCAGT 1392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14383433158025