Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_027637.1 Length=4656 Score E Sequences producing significant alignments: (Bits) Value seq3044 233 6e-58 >seq3044 Length=1521 Score = 233 bits (258), Expect = 6e-58 Identities = 391/559 (70%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 61 CCCCGTGCTATTTTTAATCGTACTTTTACTCATAAGACTACTTGTAACGCCGGT-ATGTT 119 || ||| || |||| |||||||| | | | |||||||||| | | ||| || || Sbjct 839 CCTCGTTCTTCTTTTGATCGTACTCATGGTTACAAGACTACTTTTTCGTCAGGTTATCTT 898 Query 120 GATTCCGTTTCTTATTGATGAGATTTATCCTGGCGATACTTTTAAGCTTCGTTCTACTTT 179 | | | |||| || | |||||| | ||| ||||| ||||||| ||| || || Sbjct 899 GTTCCAGTTTTTTGT-GATGAGGCTCTTCCCGGCGACACTTTTACGCTCGATTTGACAGC 957 Query 180 TCTTGCTCGTATGTCTACTCCCATTTATCCGGTTATGGACAATTTATTCATCGATACCCA 239 ||| ||||||| |||| || |||||||| |||||||| || |||| | || || || Sbjct 958 GTTTGTTCGTATGGCTACGCCTATTTATCCCGTTATGGATAACTTATATTTAGACACTCA 1017 Query 240 ATTTTTCTTTATACCCAATCGTTTACTTTGGACCCACTGGGAGCAGTTTATGGGTTACCA 299 ||||||||| | || ||||||| || |||| | ||||| | |||| ||| || Sbjct 1018 CTTTTTCTTTGTTCCTTATCGTTTGCTCTGGAATAATTGGGAACGTTTTAACGGTGCTCA 1077 Query 300 AGAAAACCCTGGCGATTCTATCGATTACACTTTGCCTACTATTACTAGTCCTACTGGTGG 359 ||| || ||||| | ||| | |||||| | | |||| |||||| |||||||||||| Sbjct 1078 AGACAATCCTGGTGCTTCAACCGATTATCTTGTTCCTAAAATTACTGCTCCTACTGGTGG 1137 Query 360 TTATT-TAGAGCAAACTATTTATGACTATCTTGGCCTCCCTACTAAGATTGCTGGTGTTA 418 |||| || | || ||||||||||| |||| || ||||| || |||||||| || Sbjct 1138 CTATTCTACTG-GGTCTCTTTATGACTATTTTGGTCTTCCTACGAAAGTTGCTGGTTTTG 1196 Query 419 CCCATCAAGCACTTCCTTTGCGTGCTTACAACAAGGTTTATAATGATTGGTATCGCGATC 478 ||| || | || | || ||||||||| |||| || || |||| || || Sbjct 1197 ATCATTCGGCTTTGCCGCTTCGAGCTTACAACCTCATTTACAACGAATGGTTCCGTGACG 1256 Query 479 AGAATTTACAAGATTCTGTTGTTTTGCCTAA---TGGTGATGGTCCTGATGCTCCTACTG 535 | ||| | ||| |||| || ||| || ||||||||||||||||| |||| || Sbjct 1257 AAAATCTTCAAAATTC---GGTCTTGGAAAACGTTGGTGATGGTCCTGATGATCCTGCTA 1313 Query 536 ATTATGTTTTGTTGCCTCGTGGTAAACGCCACGATTATTTTACCTCTGCACTTCCTACAC 595 ||| || | | | ||| ||||||||||||||||||||||| ||||| | ||| | Sbjct 1314 ATTTCGTGCTCCTTCGTCGCGGTAAACGCCACGATTATTTTACTTCTGCTTTACCTTGGC 1373 Query 596 CTCAGAAGGGTGCTGCTGT 614 |||| |||||| | || || Sbjct 1374 CTCAAAAGGGTCCGGCAGT 1392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14786617268795