Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_027642.1 Length=4624 Score E Sequences producing significant alignments: (Bits) Value seq3044 96.9 1e-16 >seq3044 Length=1521 Score = 96.9 bits (106), Expect = 1e-16 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 420 TCGGGCGTATAATTTGATTTGGAATCAGTGGTTTCGTGATCAGAATTTGCAGAATTCTGT 479 ||| || || || | |||| || | ||||| ||||| | ||| | || ||||| || Sbjct 1216 TCGAGCTTACAACCTCATTTACAACGAATGGTTCCGTGACGAAAATCTTCAAAATTCGGT 1275 Query 480 TGTTGTCGATATGGGTGACGGTCCTGATAATCCGGCTAATTATGTTTTGTTGAGGCGCGG 539 | | | | ||||| ||||||||| |||| ||||||| || | | | ||||| Sbjct 1276 CTTGGAAAACGTTGGTGATGGTCCTGATGATCCTGCTAATTTCGTGCTCCTTCGTCGCGG 1335 Query 540 TAAGCGCCATGATTATTTTACGGCGTCGTTGCCTTGGCCTCAGAAGGGTCCGTCTGTTTC 599 ||| ||||| ||||||||||| | | || ||||||||||| ||||||||| | || Sbjct 1336 TAAACGCCACGATTATTTTACTTCTGCTTTACCTTGGCCTCAAAAGGGTCCGGCAGTAAA 1395 Query 600 TATTCCTCTTGGCGGTACGGCTCCTGTT 627 | | ||||| ||| | | ||||| ||| Sbjct 1396 TCTGCCTCTCGGCTCTTCTGCTCCAGTT 1423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14684221304155