Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq341976 87.8 6e-14 >seq341976 Length=3645 Score = 87.8 bits (96), Expect = 6e-14 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Plus Query 917 TGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACCCAGC--ACGGCCGTTTACATTTTC 974 ||| |||||||||||||||| ||||||||||| | |||| | |||||| | ||||| | Sbjct 903 TGCGATCAGTATTTTTGTGTCCCTGAGTATGGTA--CAGCTAATGGCCGTCTTCATTTCC 960 Query 975 ACGCAGTGCACCTTATGCGCACACTTCCT 1003 | || |||||| ||||||| ||||||||| Sbjct 961 ATGCGGTGCACTTTATGCGGACACTTCCT 989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17265844928505