Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_011058.1 Length=2584 Score E Sequences producing significant alignments: (Bits) Value seq507158 78.8 2e-11 >seq507158 Length=1083 Score = 78.8 bits (86), Expect = 2e-11 Identities = 133/188 (71%), Gaps = 5/188 (3%) Strand=Plus/Minus Query 990 AAGTTCTTTAAGAGGCTGGGTGTGTCA-ACGGAGTGGAAAAATAGTTCCACGGGGGATGT 1048 |||||||| |||| || |||||| | ||||||||||| |||| | || | | | Sbjct 283 AAGTTCTTCAAGAAACTTGGTGTGACTGACGGAGTGGAAGAATACTAGAGAAGGAGGTTT 224 Query 1049 TGGTGATATAAAGGAAGGAGCCCTTTACATTGTAGGTGCTCCTTCCCAGAAGTCTGATGT 1108 || || || || || || ||||| || |||| || |||||| | | | ||| Sbjct 223 AGGAGACATTAAAGAGGGGGCCCTCTATGTTGTTGGGGCTCCTAGTTATGGTTTTACTGT 164 Query 1109 ATATGTAAATG-GTTATTTCCGAGTGTACTTCAAGTCCGTTGGCAATCAATAAAAATTTA 1167 | ||||||||| | |||| || || || |||||||| ||||| |||||| ||||||| Sbjct 163 AAATGTAAATGCGCGATTT-CGCGTATATTTCAAGTCTGTTGGATATCAAT--AAATTTA 107 Query 1168 TTATTATG 1175 | |||||| Sbjct 106 TAATTATG 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8079403073100