Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq145826 100 1e-17 >seq145826 Length=33368 Score = 100 bits (110), Expect = 1e-17 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 989 ATGCGCACACTTCCTCTGGGTTCTCTGCACCCTAACTTCGGTAAGCTGGTACGCATCAAT 1048 |||| ||||||||| ||| | ||||||| || ||| | |||||||| Sbjct 5057 ATGCTGACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGC 5116 Query 1049 CGGCAAATAAATAGCTTGCAAAACACGTGGCCTTATGGTTACTCTATGCCCATCGCAGTC 1108 || || |||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 5117 CGCCATTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTT 5176 Query 1109 CGGTACTCCCAAGACGCATTCTC 1131 || ||| | || ||||| || || Sbjct 5177 CGCTACACGCAGGACGCTTTTTC 5199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17701765129410