Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= NC_004660.1 Length=2589 Score E Sequences producing significant alignments: (Bits) Value seq22131 77.0 5e-11 >seq22131 Length=2017 Score = 77.0 bits (84), Expect = 5e-11 Identities = 122/167 (73%), Gaps = 15/167 (9%) Strand=Plus/Plus Query 1 TGGCATTTCTGTAATAAGAAGGGTGTACACC--AGTTGAGCTCTCTCAAACTTGCTGAT- 57 |||||| | |||||||||| | | | | || || |||||| || |||||| ||| Sbjct 1676 TGGCATATTTGTAATAAGA-GTGAGGCCTCCGAAGCAGAGCTCCCTTCAACTTGGTGAAA 1734 Query 58 TCAATTGGTGTATTGGGGTGCAATATATAGTATAACTCTCATTAACG-----GATTC--- 109 | |||||| | | ||| || | ||||||| || ||| || | || | ||| | Sbjct 1735 TGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAGT 1793 Query 110 TCA-ACACGTGGCGGCCATCCGT-ATAATATTACCGGATGGCCGCGC 154 ||| |||||||||| |||||||| ||||||||||||||||| ||||| Sbjct 1794 TCACACACGTGGCGTCCATCCGTTATAATATTACCGGATGGACGCGC 1840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8161384383110