Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= NC_011058.1 Length=2584 Score E Sequences producing significant alignments: (Bits) Value seq139235 80.6 4e-12 >seq139235 Length=77152 Score = 80.6 bits (88), Expect = 4e-12 Identities = 132/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 990 AAGTTCTTTAAGAGGCTGGGTGTGTCAACGGAGTGGAAAAATAGTTCCACGGGGGATGTT 1049 |||||||| |||| || |||||| | ||||||||||| |||| | || | | Sbjct 2406 AAGTTCTTCAAGAAACTTGGTGTGACGACGGAGTGGAAGAATACTAGAGAAGGAGGCATA 2347 Query 1050 GGTGATATAAAGGAAGGAGCCCTTTACATTGTAGGTGCTCCTTCCCAGAAGTCTGATGTA 1109 || || || || || || ||||| || ||||| || |||||| | | | |||| Sbjct 2346 GGAGACATTAAAGAGGGGGCCCTCTATATTGTTGGGGCTCCTAGTTATGGTTTTACTGTA 2287 Query 1110 TATGTAAATG-GTTATTTCCGAGTGTACTTCAAGTCCGTTGGCAATCAATAAAAATTTAT 1168 ||||||||| | |||| || || || |||||||| ||||| |||||| |||||||| Sbjct 2286 AATGTAAATGCGCGATTT-CGCGTATATTTCAAGTCTGTTGGATATCAAT--AAATTTAT 2230 Query 1169 TATTATG 1175 ||| || Sbjct 2229 AATTCTG 2223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8145412985100