Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= NC_014739.1 Length=2605 Score E Sequences producing significant alignments: (Bits) Value seq139235 80.6 4e-12 >seq139235 Length=77152 Score = 80.6 bits (88), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 1035 GGTGTTAGTACTGAGTGGAAGAACTCTTCCACCGGAGACGTAGGTGACATAAAAGAAGGG 1094 ||||| | || ||||||||||| || |||| | |||| ||||| ||||| ||| Sbjct 2388 GGTGTGACGACGGAGTGGAAGAATACTAGAGAAGGAGGCATAGGAGACATTAAAGAGGGG 2329 Query 1095 GCGTTGTACATAGTAGTAGCCCCTTCCCAGAGTTGTGATGTTTATGTTAATG-GTTATTT 1153 || | || || || | || ||| | ||| | ||| |||| |||| | |||| Sbjct 2328 GCCCTCTATATTGTTGGGGCTCCTAGTTATGGTTTTACTGTAAATGTAAATGCGCGATTT 2269 Query 1154 CCGAGTGTATTTTAAGTCCGTTGGAAATCAATAAAATTATTATTCTGTTATGA 1206 || || ||||| ||||| |||||| ||||||||| |||| ||||||| |||| Sbjct 2268 -CGCGTATATTTCAAGTCTGTTGGATATCAATAAATTTATAATTCTGTGATGA 2217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8212492856742