Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= NC_017002.1 Length=2577 Score E Sequences producing significant alignments: (Bits) Value seq61915 78.8 2e-11 >seq61915 Length=2745 Score = 78.8 bits (86), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 2489 AATTGGTGACTGGTGTACAATATATAGTAGAAGCCTCTATCTGTCTAATT-ATCTCGTTC 2547 |||||| ||||| |||||||||||| ||||| ||| || | || ||| ||| |||| Sbjct 1763 AATTGGAGACTGTAGTACAATATATACTAGAACCCT-TAATAGCCTTATTGATCCAGTTC 1705 Query 2548 ACCCACGTGGCGGCCATCCGCTATAATATT 2577 || ||||||||| ||||||| ||||||||| Sbjct 1704 ACACACGTGGCGTCCATCCGTTATAATATT 1675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8123053027886