Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_001467.1 Length=2779 Score E Sequences producing significant alignments: (Bits) Value seq70950 86.0 1e-13 >seq70950 Length=3752 Score = 86.0 bits (94), Expect = 1e-13 Identities = 181/263 (69%), Gaps = 8/263 (3%) Strand=Plus/Minus Query 2344 TTAAGCGCTTTGGCGTAAGCATCATTCGCTGATTGTTGACCGCCTCTAGCAGATCGTCCA 2403 |||| || || ||||| | |||||| || ||||| ||| |||||| |||| ||| Sbjct 2655 TTAATGGCCTTTGCGTATGAATCATTGGCAGATTGGCAACCTCCTCTACTTGATCTGCCA 2596 Query 2404 TCGATTTGAAATTGTCCCCATTCGACGGTGTCGCCGTCCTTATCCAGATAGGACTTGACA 2463 |||||||| || ||| | || | | ||| ||||| || |||| | | || ||| Sbjct 2595 TCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGAATGTTTTAACA 2536 Query 2464 TCCGAGCTTGATTTGGCACCTTGAATGTTGGGGTGGAAACTGGTGCT--ACAGCTTGGGT 2521 || ||| || || ||||| |||||||| || || ||| ||||| | | ||||| Sbjct 2535 TCGGAGGAGGACTTAGCACCCTGAATGTTCGGATGAAAA--TGTGCTGACCTGGTTGGG- 2479 Query 2522 GTACACAA-TCGAAGAGACGATTGTTCGTAATCGTGAT-TTTACCCTCGAATTGAATGAG 2579 | | || ||||| | | |||||| || | | || || || |||||||| ||||| Sbjct 2478 GAAGTGAAGTCGAATACTCTATTGTTGGTGA-AGACATACTTGCCTTCGAATTGGATGAG 2420 Query 2580 GGCATGCAAGTGAGGTTCCCCAT 2602 |||| | ||||||||||||| Sbjct 2419 CACATGGAGATGAGGTTCCCCAT 2397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8765477010080