Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_003861.1 Length=2755 Score E Sequences producing significant alignments: (Bits) Value seq82408 104 4e-19 seq70950 98.7 2e-17 seq154006 95.1 2e-16 seq104008 89.7 9e-15 seq80753 89.7 9e-15 seq118076 87.8 3e-14 seq100414 87.8 3e-14 seq77743 87.8 3e-14 seq96245 86.0 1e-13 seq118049 80.6 5e-12 >seq82408 Length=6188 Score = 104 bits (114), Expect = 4e-19 Identities = 276/410 (67%), Gaps = 14/410 (3%) Strand=Plus/Minus Query 2075 AGGAGGTGTAAAAATC-CTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAAT 2133 |||||| | | |||| |||||||||||||| ||| |||| || | | || ||||| Sbjct 5226 AGGAGG-GCAGAAATGTCTATCTAAATTAGCCCTTAATTTATCTAAATCTCTAATATAAT 5168 Query 2134 CCTTGGGTGCTAACTCC-TTAATGACTCTAAGAGCCTC--TGGCTTACTGCCTGTGTTAA 2190 | |||| | |||| ||||| | | |||| || | ||| | |||| |||| Sbjct 5167 CTCTGGGCTGTTCCTCCATTAAT-ATTTTAAGGGCATTAATGGTGGAT--CCTGAATTAA 5111 Query 2191 GTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGA 2250 || ||||| | |||||||| | || || ||||| ||||| ||||||| Sbjct 5110 TGGCCTTTGCGTATGAATCGTTGGCAGATTGGCAACCTCCTCTACTTGATCTGCCATCGA 5051 Query 2251 TCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTG 2310 | || || | || | || ||| |||||| || || || | ||| | || || || | Sbjct 5050 TTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTATGTTTTAACATCGG 4991 Query 2311 AGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--CTGCTTGGGTGTAC 2368 || ||||||||| | ||| ||||| || |||||| ||||| ||| ||||| | | Sbjct 4990 AGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGGTTGGG-GAAG 4934 Query 2369 ACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCAT 2427 | |||||| | |||||| ||| ||| |||||||| || | || ||| Sbjct 4933 TGAGGTCGAATGCTCTATTGTTGGTGCAGACATACTTGCCTTCGAATTGGATGAGTACAT 4874 Query 2428 GGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAAT 2477 |||| ||||||||||||| | ||| | ||||||| |||| |||||||| Sbjct 4873 GGAGATGAGGTTCCCCATCTTCATGTAATTCTCTGGAAATCCTAATAAAT 4824 >seq70950 Length=3752 Score = 98.7 bits (108), Expect = 2e-17 Identities = 276/410 (67%), Gaps = 14/410 (3%) Strand=Plus/Minus Query 2075 AGGAGGTGTAAAAATC-CTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAAT 2133 |||||| | | |||| |||||||||||||| ||| |||| || | | || ||||| Sbjct 2767 AGGAGG-GCAGAAATGTCTATCTAAATTAGCCCTTAATTTATCTAAATCTCTAATATAAT 2709 Query 2134 CCTTGGGTGCTAACTCC-TTAATGACTCTAAGAGC-CTC-TGGCTTACTGCCTGTGTTAA 2190 | ||||| | |||| ||||| | | |||| || || ||| | | | ||| |||| Sbjct 2708 CTCTGGGTTGTTCCTCCATTAAT-ATTTTAAGGGCACTAGTGGTTCATT--CTGAATTAA 2652 Query 2191 GTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGA 2250 || ||||| | || ||||| | || || ||||| ||||| ||||||| Sbjct 2651 TGGCCTTTGCGTATGAATCATTGGCAGATTGGCAACCTCCTCTACTTGATCTGCCATCGA 2592 Query 2251 TCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTG 2310 | || || | || | || ||| |||||| || || || | | | | || || || | Sbjct 2591 TTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGAATGTTTTAACATCGG 2532 Query 2311 AGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--CTGCTTGGGTGTAC 2368 || ||||||||| | ||| ||||| || || ||| ||||| ||| ||||| | | Sbjct 2531 AGGAGGACTTAGCACCCTGAATGTTCGGATGAAAAT--GTGCTGACCTGGTTGGG-GAAG 2475 Query 2369 ACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCAT 2427 || |||||| | |||||| |||| ||| |||||||| || | || ||| Sbjct 2474 TGAAGTCGAATACTCTATTGTTGGTGAAGACATACTTGCCTTCGAATTGGATGAGCACAT 2415 Query 2428 GGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAAT 2477 |||| ||||||||||||| | || | ||||||| ||| |||||||| Sbjct 2414 GGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATAAAT 2365 >seq154006 Length=59937 Score = 95.1 bits (104), Expect = 2e-16 Identities = 274/410 (67%), Gaps = 14/410 (3%) Strand=Plus/Minus Query 2075 AGGAGGTGTAAAAATC-CTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAAT 2133 |||||| | | |||| |||||||||||||| ||| |||| || | | || ||||| Sbjct 55784 AGGAGG-GCAGAAATGTCTATCTAAATTAGCCCTTAATTTATCTAAATCTCTAATATAAT 55726 Query 2134 CCTTGGGTGCTAACTCC-TTAATGACTCTAAGAGCCTC--TGGCTTACTGCCTGTGTTAA 2190 | |||| | |||| ||||| | | |||| || | ||| | |||| |||| Sbjct 55725 CTCTGGGCTGTTCCTCCATTAAT-ATTTTAAGGGCATTAATGGTGGAT--CCTGAATTAA 55669 Query 2191 GTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGA 2250 || ||||| | |||||||| | || || ||||| ||||| ||||||| Sbjct 55668 TGGCCTTTGCGTATGAATCGTTGGCAGATTGGCAACCTCCTCTACTTGATCTGCCATCGA 55609 Query 2251 TCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTG 2310 | || || | || | || ||| |||||| || || || | ||| | || || || | Sbjct 55608 TTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTATGTTTTAACATCGG 55549 Query 2311 AGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--CTGCTTGGGTGTAC 2368 || ||||||||| | ||| ||||| || |||||| ||||| ||| ||||| | | Sbjct 55548 AGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGGTTGGG-GAAG 55492 Query 2369 ACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCAT 2427 | |||||| | |||||| ||| ||| |||||||| || | || ||| Sbjct 55491 TGAGGTCGAATGCTCTATTGTTGGTGCAGACATACTTGCCTTCGAATTGGATGAGCACAT 55432 Query 2428 GGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAAT 2477 |||| ||||||||||||| | || | ||||||| ||| |||||||| Sbjct 55431 GGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATAAAT 55382 Score = 95.1 bits (104), Expect = 2e-16 Identities = 274/410 (67%), Gaps = 14/410 (3%) Strand=Plus/Minus Query 2075 AGGAGGTGTAAAAATC-CTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAAT 2133 |||||| | | |||| |||||||||||||| ||| |||| || | | || ||||| Sbjct 57253 AGGAGG-GCAGAAATGTCTATCTAAATTAGCCCTTAATTTATCTAAATCTCTAATATAAT 57195 Query 2134 CCTTGGGTGCTAACTCC-TTAATGACTCTAAGAGCCTC--TGGCTTACTGCCTGTGTTAA 2190 | |||| | |||| ||||| | | |||| || | ||| | |||| |||| Sbjct 57194 CTCTGGGCTGTTCCTCCATTAAT-ATTTTAAGGGCATTAATGGTGGAT--CCTGAATTAA 57138 Query 2191 GTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGA 2250 || ||||| | |||||||| | || || ||||| ||||| ||||||| Sbjct 57137 TGGCCTTTGCGTATGAATCGTTGGCAGATTGGCAACCTCCTCTACTTGATCTGCCATCGA 57078 Query 2251 TCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTG 2310 | || || | || | || ||| |||||| || || || | ||| | || || || | Sbjct 57077 TTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTATGTTTTAACATCGG 57018 Query 2311 AGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--CTGCTTGGGTGTAC 2368 || ||||||||| | ||| ||||| || |||||| ||||| ||| ||||| | | Sbjct 57017 AGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGGTTGGG-GAAG 56961 Query 2369 ACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCAT 2427 | |||||| | |||||| ||| ||| |||||||| || | || ||| Sbjct 56960 TGAGGTCGAATGCTCTATTGTTGGTGCAGACATACTTGCCTTCGAATTGGATGAGCACAT 56901 Query 2428 GGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAAT 2477 |||| ||||||||||||| | || | ||||||| ||| |||||||| Sbjct 56900 GGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATAAAT 56851 Score = 87.8 bits (96), Expect = 3e-14 Identities = 168/243 (69%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 2238 GATCTTCCATCGATCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAG 2297 ||||| |||||||| || || | || | || ||| |||||| || || || | ||| Sbjct 59195 GATCTGCCATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTAT 59136 Query 2298 GACTTGACGTCTGAGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--C 2355 | || || || ||| ||||||||| | ||| ||||| || |||||| ||||| | Sbjct 59135 GTTTTAACATCGGAGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC 59078 Query 2356 TGCTTGGGTGTACACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAAC 2414 || ||||| | | | |||||| | |||||| ||| ||| |||||||| Sbjct 59077 TGGTTGGG-GAAGTGAGGTCGAATGCTCTATTGTTGGTGCAGACATACTTGCCTTCGAAT 59019 Query 2415 TGAAGCAGAGCATGGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATA 2474 || | || ||||||| ||||||||||||| | || | ||||||| ||| ||||| Sbjct 59018 TGGATGAGCACATGGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATA 58959 Query 2475 AAT 2477 ||| Sbjct 58958 AAT 58956 >seq104008 Length=3583 Score = 89.7 bits (98), Expect = 9e-15 Identities = 166/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 2238 GATCTTCCATCGATCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAG 2297 ||||| |||||||| || || | || | || ||| |||||| || || || | ||| Sbjct 2248 GATCTGCCATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTAT 2189 Query 2298 GACTTGACGTCTGAGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--C 2355 | || || || ||| ||||||||| | ||| ||||| || |||||| ||||| | Sbjct 2188 GTTTTAACATCGGAGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC 2131 Query 2356 TGCTTGGGTGTACACAATCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACT 2415 || ||||| | |||||| | |||||| ||| ||| |||||||| | Sbjct 2130 TGGTTGGGGAAATGAGGTCGAATGCTCTATTGTTGGTGCAGACACACTTGCCTTCGAATT 2071 Query 2416 GAAGCAGAGCATGGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAA 2475 | | || ||||||| ||||||||||||| | || | ||||||| ||| |||||| Sbjct 2070 GGATGAGCACATGGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATAA 2011 Query 2476 AT 2477 || Sbjct 2010 AT 2009 Score = 86.0 bits (94), Expect = 1e-13 Identities = 272/410 (66%), Gaps = 14/410 (3%) Strand=Plus/Minus Query 2075 AGGAGGTGTAAAAATC-CTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAAT 2133 |||||| | | |||| |||||||||||||| ||| |||| || | | || ||||| Sbjct 1143 AGGAGG-GCAGAAATGTCTATCTAAATTAGCCCTTAATTTATCTAAATCTCTAATATAAT 1085 Query 2134 CCTTGGGTGCTAACTCC-TTAATGACTCTAAGAGCCTC--TGGCTTACTGCCTGTGTTAA 2190 | |||| | |||| ||||| | | |||| || | ||| | |||| |||| Sbjct 1084 CTCTGGGCTGTTCCTCCATTAAT-ATTTTAAGGGCATTAATGGTGGAT--CCTGAATTAA 1028 Query 2191 GTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGA 2250 || ||||| | |||||||| | || || || || ||||| ||||||| Sbjct 1027 TGGCCTTTGCGTATGAATCGTTGGCAGATTGGCAACCTCCCCTACTTGATCTGCCATCGA 968 Query 2251 TCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTG 2310 | || || | || | || ||| |||||| || || || | ||| | || || | | Sbjct 967 TTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTATGTTTTAACATTGG 908 Query 2311 AGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--CTGCTTGGGTGTAC 2368 || ||||||||| | ||| ||||| || |||||| ||||| ||| ||||| | | Sbjct 907 AGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGGTTGGG-GAAG 851 Query 2369 ACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCAT 2427 | |||||| | |||||| ||| ||| |||||||| || | || ||| Sbjct 850 TGAGGTCGAATGCTCTATTGTTGGTGCAGACACACTTGCCTTCGAATTGGATGAGCACAT 791 Query 2428 GGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAAT 2477 |||| ||||||||||||| | || | ||||||| ||| |||||||| Sbjct 790 GGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATAAAT 741 >seq80753 Length=2195 Score = 89.7 bits (98), Expect = 9e-15 Identities = 273/410 (67%), Gaps = 14/410 (3%) Strand=Plus/Minus Query 2075 AGGAGGTGTAAAAATC-CTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAAT 2133 |||||| | | |||| |||||||||||||| ||| |||| || | | || ||||| Sbjct 1157 AGGAGG-GCAGAAATGTCTATCTAAATTAGCCCTTAATTTATCTAAATCTGTAATATAAT 1099 Query 2134 CCTTGGGTGCTAACTCC-TTAATGACTCTAAGAGCCTC--TGGCTTACTGCCTGTGTTAA 2190 | |||| | |||| ||||| | | |||| || | ||| | |||| |||| Sbjct 1098 CTCTGGGCTGTTCCTCCATTAAT-ATTTTAAGGGCATTAATGGTGGAT--CCTGAATTAA 1042 Query 2191 GTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGA 2250 || || || | |||||||| | || || ||||| ||||| ||||||| Sbjct 1041 TGGCCTTTGCATATGAATCGTTGGCAGATTGGCAACCTCCTCTACTTGATCTGCCATCGA 982 Query 2251 TCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTG 2310 | || || | || | || ||| |||||| || || || | ||| | || || || | Sbjct 981 TTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTATGTTTTAACATCGG 922 Query 2311 AGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--CTGCTTGGGTGTAC 2368 || ||||||||| | ||| ||||| || |||||| ||||| ||| ||||| | | Sbjct 921 AGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGGTTGGG-GAAG 865 Query 2369 ACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCAT 2427 | |||||| | |||||| ||| ||| |||||||| || | || ||| Sbjct 864 TGAGGTCGAATGCTCTATTGTTGGTGCAGACATACTTGCCTTCGAATTGGATGAGCACAT 805 Query 2428 GGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAAT 2477 |||| ||||||||||||| | ||| | || |||| ||| |||||||| Sbjct 804 GGAGATGAGGTTCCCCATCTTCATGTATTTTTCTGGAAACCCTAATAAAT 755 >seq118076 Length=24012 Score = 87.8 bits (96), Expect = 3e-14 Identities = 168/243 (69%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 2238 GATCTTCCATCGATCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAG 2297 ||||| |||||||| || || | || | || ||| |||||| || || || | ||| Sbjct 2041 GATCTGCCATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTAT 1982 Query 2298 GACTTGACGTCTGAGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--C 2355 | || || || ||| ||||||||| | ||| ||||| || |||||| ||||| | Sbjct 1981 GTTTTAACATCGGAGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC 1924 Query 2356 TGCTTGGGTGTACACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAAC 2414 || ||||| | | | |||||| | |||||| ||| ||| |||||||| Sbjct 1923 TGGTTGGG-GAAGTGAGGTCGAATGCTCTATTGTTGGTGCAGACATACTTGCCTTCGAAT 1865 Query 2415 TGAAGCAGAGCATGGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATA 2474 || | || ||||||| ||||||||||||| | || | ||||||| ||| ||||| Sbjct 1864 TGGATGAGCACATGGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATA 1805 Query 2475 AAT 2477 ||| Sbjct 1804 AAT 1802 >seq100414 Length=7639 Score = 87.8 bits (96), Expect = 3e-14 Identities = 170/244 (70%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 2238 GATCTTCCATCGATCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAG 2297 ||||| |||||||| || || | || | || ||| |||||| || || || | ||| Sbjct 6352 GATCTACCATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTAT 6411 Query 2298 GACTTGACGTCTGAGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--C 2355 | || || || ||| ||||||||| | ||| ||||| || |||||| ||||| | Sbjct 6412 GTTTTAACATCGGAGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC 6469 Query 2356 TGCTTGGGTGTACACAA-TCGAATTGCCGATTGTTTGTG-ATCGTGAGCTTCCCTTCGAA 2413 || ||||| | | | |||||| | |||||| ||| || | ||| ||||| || Sbjct 6470 TGGTTGGG-GAAGTGAGGTCGAATGCTCTATTGTTGGTGCATACATA-CTTGCCTTCAAA 6527 Query 2414 CTGAAGCAGAGCATGGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAAT 2473 || | || ||||||| ||||||||||||| | || | ||||||| ||| |||| Sbjct 6528 TTGGATGAGCACATGGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAAT 6587 Query 2474 AAAT 2477 |||| Sbjct 6588 AAAT 6591 >seq77743 Length=3059 Score = 87.8 bits (96), Expect = 3e-14 Identities = 170/244 (70%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 2238 GATCTTCCATCGATCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAG 2297 |||||||||||||| || || | || | || ||| ||||||||| || || | ||| Sbjct 2038 GATCTTCCATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCATCTTTCTCCACGTAT 2097 Query 2298 GACTTGACGTCTGAGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCT--AC 2355 | || || || ||| ||||||||| | || || || || |||||| ||||| | Sbjct 2098 GTTTTAACATCGGAGGAGGACTTAGCTCCGTGAATATTCGGATGGAAA--TGTGCTGACC 2155 Query 2356 TGCTTGGGTGTACACA-ATCGAATTGCCGATTGTTTGTG-ATCGTGAGCTTCCCTTCGAA 2413 || ||||| | | | ||||||| | |||||| ||| || | ||| ||||||| Sbjct 2156 TGGTTGGG-GAAGTGAGATCGAATGCTCTATTGTTGGTGCATACATA-CTTGACTTCGAA 2213 Query 2414 CTGAAGCAGAGCATGGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAAT 2473 || | || ||||||| ||||||| ||||| | || | ||||||| ||| |||| Sbjct 2214 TTGGATGAGCACATGGAGATGAGGTTTCCCATCTTCGTGTAATTCTCTGGAAACCCTAAT 2273 Query 2474 AAAT 2477 |||| Sbjct 2274 AAAT 2277 Score = 82.4 bits (90), Expect = 1e-12 Identities = 272/410 (66%), Gaps = 15/410 (4%) Strand=Plus/Plus Query 2075 AGGAGGTGTAAAAATC-CTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAAT 2133 |||||| | | |||| |||||||||||||| ||| |||| || | | || ||||| Sbjct 610 AGGAGG-GCAGAAATGTCTATCTAAATTAGCCCTTAATTTATCTAAATCTCTAATATAAT 668 Query 2134 CCTTGGGTGCTAACTCC-TTAATGACTCTAAGAGCCTC--TGGCTTACTGCCTGTGTTAA 2190 | ||||| | |||| ||||| | | |||| || | ||| | |||| |||| Sbjct 669 CTATGGGTTGTTCCTCCATTAAT-ATTTTAAGGGCATTAATGGTGGAT--CCTGAATTAA 725 Query 2191 GTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGA 2250 || ||||| | |||||||| | || | || ||| ||||| ||||||| Sbjct 726 TGGCCTTTGCGTATGAATCGTTGGCAGATTGGAAACTCC-TCTACTTGATCTGCCATCGA 784 Query 2251 TCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTG 2310 | || || | || | || ||| |||||| || || || | | | | || || || | Sbjct 785 TTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGAATGTTTTAACATCAG 844 Query 2311 AGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--CTGCTTGGGTGTAC 2368 || |||| |||| | ||| ||||| || |||||| ||||| ||| ||||| | | Sbjct 845 AGGAGGACATAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGGTTGGG-GAAG 901 Query 2369 ACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCAT 2427 | |||||| | |||||| ||| ||| |||||||| || | || ||| Sbjct 902 TGAGGTCGAATGCTCTATTGTTGGTGCAGACATACTTGCCTTCGAATTGGATGAGCACAT 961 Query 2428 GGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAAT 2477 |||| ||||||||||||| | || | ||||||| ||| |||||||| Sbjct 962 GGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATAAAT 1011 >seq96245 Length=3676 Score = 86.0 bits (94), Expect = 1e-13 Identities = 273/410 (67%), Gaps = 14/410 (3%) Strand=Plus/Plus Query 2075 AGGAGGTGTAAAAATC-CTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAAT 2133 |||||| | | |||| |||||||||||||| ||| |||| || | | || ||||| Sbjct 1403 AGGAGG-GCAGAAATGTCTATCTAAATTAGCCCTTAATTTATCTAAATCTCTAATATAAT 1461 Query 2134 CCTTGGGTGCTAACTCC-TTAATGACTCTAAGAGCCTC--TGGCTTACTGCCTGTGTTAA 2190 | |||| | |||| ||||| | | |||| || | ||| | |||| |||| Sbjct 1462 CTCTGGGCTGTTCCTCCATTAAT-ATTTTAAGGGCATTAATGGTGGAT--CCTGAATTAA 1518 Query 2191 GTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGA 2250 || ||||| | |||||||| | || || ||||| ||||| ||||| | Sbjct 1519 TGGCCTTTGCGTATGAATCGTTGGCAGATTGGCAACCTCCTCTACTTGATCTGCCATCAA 1578 Query 2251 TCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTG 2310 | || || | || | || ||| ||||| || || || ||||| | || || || | Sbjct 1579 TTTGGAAAACTCCAAAATCAATGAAGTCTCTGTCTTTCTCCATGTATGTTTTAACATCGG 1638 Query 2311 AGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCT-AC-TGCTTGGGTGTAC 2368 || || |||||| | ||| ||||| || |||||| ||||| || || ||||| | | Sbjct 1639 AGGAGGTCTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACATGGTTGGG-GAAG 1695 Query 2369 ACAA-TCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCAT 2427 | |||||| | |||||| ||| | ||| |||||||| || | || ||| Sbjct 1696 TGAGGTCGAATGCTCTATTGTTGGTGCAGATATACTTGCCTTCGAATTGGATGAGCACAT 1755 Query 2428 GGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAAT 2477 |||| |||||||||||| | || | ||||||| ||| |||||||| Sbjct 1756 GGAGAAGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATAAAT 1805 >seq118049 Length=618 Score = 80.6 bits (88), Expect = 5e-12 Identities = 162/234 (69%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 2238 GATCTTCCATCGATCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAG 2297 ||||| |||||||| || || | || | || ||| ||||| || || || | ||| Sbjct 319 GATCTGCCATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCTGTCTTTCTCCACGTAT 378 Query 2298 GACTTGACGTCTGAGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTA--C 2355 | || || || ||| ||||||||| | ||| ||||| || |||||| ||||| | Sbjct 379 GTTTTAACATCGGAGGAGGACTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC 436 Query 2356 TGCTTGGGTGTACACA-ATCGAATTGCCGATTGTTTGTG--ATCGTGAGCTTCCCTTCGA 2412 || ||||| | | | ||||||| | |||||| ||| | | | ||| ||||||| Sbjct 437 TGGTTGGG-GAAGTGAGATCGAATGTTCTATTGTTGGTGCAAACATA--CTTGCCTTCGA 493 Query 2413 ACTGAAGCAGAGCATGGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAA 2466 | || | || || |||| ||||||||||||| | || | ||||||| ||| Sbjct 494 ATTGGATGAGCACAAGGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAA 547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8692439576328