Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_003868.1 Length=2586 Score E Sequences producing significant alignments: (Bits) Value seq118076 91.5 2e-15 seq154006 89.7 8e-15 seq104008 89.7 8e-15 seq100414 89.7 8e-15 seq96245 89.7 8e-15 seq94908 89.7 8e-15 seq87044 89.7 8e-15 seq80753 89.7 8e-15 seq82408 87.8 3e-14 seq156422 86.0 1e-13 seq153970 86.0 1e-13 seq136915 86.0 1e-13 seq115933 86.0 1e-13 seq87523 86.0 1e-13 seq77743 82.4 1e-12 seq70950 82.4 1e-12 seq31733 82.4 1e-12 seq152373 80.6 4e-12 seq138025 80.6 4e-12 seq119080 80.6 4e-12 seq77810 80.6 4e-12 seq74641 78.8 2e-11 seq2813 77.0 5e-11 >seq118076 Length=24012 Score = 91.5 bits (100), Expect = 2e-15 Identities = 118/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATTGG-GCTCTCTCAAACTTGCTGAT- 58 |||||||||||||||| | ||| | ||| | |||| || |||||| ||| Sbjct 10112 GTGGCATATTTGTAATAAGAGTGATGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAAA 10053 Query 59 TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTGT 118 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| || Sbjct 10052 TGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAGT 9994 Query 119 TCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 || |||||||| ||||||||| |||||||||||||| Sbjct 9993 TCACACACGTGGAGGCCATCCGTTATAATATTACCGGA 9956 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 1683 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 1625 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 1624 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 1566 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 1565 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 1527 Score = 87.8 bits (96), Expect = 3e-14 Identities = 118/158 (75%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 2 TGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT- 58 ||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 23244 TGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAAA 23186 Query 59 TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTGT 118 | |||||| || ||| ||| | |||||||||||||||| |||| |||| ||| || Sbjct 23185 TGAATTGGA-TACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAGT 23127 Query 119 TCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 || |||||||||| ||||||| |||||||||||||| Sbjct 23126 TCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 23089 Score = 82.4 bits (90), Expect = 1e-12 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 4415 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCT 4357 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||| ||| |||| |||| |||||| ||||||| |||||||||||||| Sbjct 4356 TATTAGCCTTATTGATCCAGTTCATACATGTGGCGTCCATCCGTTATAATATTACCGGA 4298 Score = 82.4 bits (90), Expect = 1e-12 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 7243 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCT 7185 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| |||||||||| ||||| | |||||||||||||| Sbjct 7184 TAATAGCCTTATTGATCCAGTTCACACACGTGGCGTCCATCTGTTATAATATTACCGGA 7126 Score = 80.6 bits (88), Expect = 4e-12 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACC-AAT-TGGGCTCTCTCAAACTTGCTG-A 57 ||||||||||||||| | || | | | || ||| | |||| || |||||| || | Sbjct 3158 GTGGCATATTTGTAA-TAAGAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 3100 Query 58 TTCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||| ||||||||| ||| |||| ||| | Sbjct 3099 ATGAATTGGAG-ACTGGAGTACCATATATAGTAGAACCCTTATTAGCCTTATTGATCCAG 3041 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 3040 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 3002 Score = 80.6 bits (88), Expect = 4e-12 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 ||||||||||| |||| || | | | |||| | | |||| || |||||| ||| Sbjct 6062 GTGGCATATTTTTAATAA-GAGTGAGGTCTCCAAATCAGAGCTCCCTTCAACTTGATGAA 6004 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| Sbjct 6003 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAA 5945 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||| | ||||||| |||||||||||||| Sbjct 5944 TTCACACACGTGGTGTCCATCCGTTATAATATTACCGGA 5906 >seq154006 Length=59937 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 55263 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 55205 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 55204 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 55146 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 55145 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 55107 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 56732 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 56674 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 56673 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 56615 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 56614 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 56576 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 58837 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 58779 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 58778 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 58720 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 58719 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 58681 >seq104008 Length=3583 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 1890 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 1832 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 1831 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 1773 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 1772 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 1734 Score = 78.8 bits (86), Expect = 2e-11 Identities = 91/119 (76%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| || | |||||||||||||||| Sbjct 3119 GCTCCCTTCAACTTGGTGAAATAAATTGGAG-ACTGGCATACCATATATACTAGAACCCT 3061 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| |||||||||| ||||||| |||||||| ||||| Sbjct 3060 TAATAGCCTTATTGATCCAGTTCACACACGTGGCGTCCATCCGTTATAATATTTCCGGA 3002 >seq100414 Length=7639 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 2508 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 2566 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 2567 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 2625 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 2626 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 2664 Score = 87.8 bits (96), Expect = 3e-14 Identities = 93/119 (78%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 4959 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCT 5017 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| |||||||||| ||||||| |||||||||||||| Sbjct 5018 TAATAGCCTTATTGATCCAGTTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 5076 Score = 78.8 bits (86), Expect = 2e-11 Identities = 91/119 (76%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 5485 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCT 5543 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| || ||||||| ||||||| ||||||||||| || Sbjct 5544 TAATAGCCTTATTGATCCAGTTCACACGCGTGGCGTCCATCCGTTATAATATTACCTGA 5602 >seq96245 Length=3676 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 1924 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 1982 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 1983 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 2041 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 2042 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 2080 >seq94908 Length=4717 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 3701 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 3643 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 3642 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 3584 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 3583 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 3545 >seq87044 Length=4357 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 3411 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 3353 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 3352 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 3294 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 3293 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 3255 Score = 87.8 bits (96), Expect = 3e-14 Identities = 93/119 (78%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 2085 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCT 2027 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| |||||||||| ||||||| |||||||||||||| Sbjct 2026 TAATAGCCTTATTGATCCAGTTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 1968 Score = 80.6 bits (88), Expect = 4e-12 Identities = 120/163 (74%), Gaps = 7/163 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 633 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 575 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||| ||| |||| |||| ||| | Sbjct 574 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAATCCTTAATAGCCTTATTGATCCAG 516 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGAATGG 159 ||| |||||||||| ||||||| ||||||||| | |||||| Sbjct 515 TTCACACACGTGGCGTCCATCCGTTATAATATTATC-GAATGG 474 >seq80753 Length=2195 Score = 89.7 bits (98), Expect = 8e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 2106 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 2048 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 2047 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 1989 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 1988 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 1950 >seq82408 Length=6188 Score = 87.8 bits (96), Expect = 3e-14 Identities = 93/119 (78%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 3380 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCT 3322 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| |||||||||| ||||||| |||||||||||||| Sbjct 3321 AAATAGCCTTATTGATCCAGTTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 3263 Score = 86.0 bits (94), Expect = 1e-13 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 725 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 667 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 666 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 608 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| ||||||||||| || Sbjct 607 TTCACACACGTGGCGTCCATCCGTTATAATATTACCAGA 569 Score = 86.0 bits (94), Expect = 1e-13 Identities = 117/157 (75%), Gaps = 6/157 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 2043 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 1985 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 1984 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 1926 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCG 153 ||| |||||||||| ||||||| |||||||||||| Sbjct 1925 TTCACACACGTGGCGTCCATCCGTTATAATATTACCG 1889 >seq156422 Length=482 Score = 86.0 bits (94), Expect = 1e-13 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACC-AATTGG-GCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || |||| | |||| || |||||| ||| Sbjct 235 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATTAGAGCTCCCTTCAACTTGGTGAA 177 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 176 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 118 Query 118 TTCCTACACGTGGCGGCCAT-CCGAATAATATTACCGGA 155 ||| | |||||||| |||| || |||||||||||||| Sbjct 117 TTCACATACGTGGCGTCCATCCCTTATAATATTACCGGA 79 >seq153970 Length=1172 Score = 86.0 bits (94), Expect = 1e-13 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 851 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 793 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 792 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 734 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| ||||| ||||| ||||||| ||||||||| |||| Sbjct 733 TTCATACACTTGGCGTCCATCCGTTATAATATTATCGGA 695 >seq136915 Length=435 Score = 86.0 bits (94), Expect = 1e-13 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || || ||| ||| Sbjct 144 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAAGTTGGTGAA 202 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 203 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 261 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 262 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 300 >seq115933 Length=1065 Score = 86.0 bits (94), Expect = 1e-13 Identities = 92/118 (78%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 40 CTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTC 98 ||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 408 CTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTT 466 Query 99 TATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| |||||||||| ||||||| |||||||||||||| Sbjct 467 AATAGCCTTATTGATCCAGTTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 524 >seq87523 Length=1929 Score = 86.0 bits (94), Expect = 1e-13 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 1595 GTGGCATATTTGTAATAA-GAGTGAGGCCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 1537 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 1536 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 1478 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| ||||||||| |||| Sbjct 1477 TTCACACACGTGGCGTCCATCCGTTATAATATTATCGGA 1439 >seq77743 Length=3059 Score = 82.4 bits (90), Expect = 1e-12 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 2434 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCT 2492 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| ||||||||| ||||||| |||||||||||||| Sbjct 2493 TAATAGCCTTATTGATCCAGTTCACACACGTGGCATCCATCCGTTATAATATTACCGGA 2551 Score = 80.6 bits (88), Expect = 4e-12 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || ||||| ||| Sbjct 1129 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTAATGAA 1187 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| | Sbjct 1188 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCCAG 1246 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||| ||| Sbjct 1247 TTCACACACGTGGCGTCCATCCGTTATAATATTACAGGA 1285 >seq70950 Length=3752 Score = 82.4 bits (90), Expect = 1e-12 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | |||||||||||||||| Sbjct 2192 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCT 2134 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| ||||||||| ||||||| |||||||||||||| Sbjct 2133 TAATAGCCTTATTGATCAAGTTCACACACGTGGCATCCATCCGTTATAATATTACCGGA 2075 Score = 78.8 bits (86), Expect = 2e-11 Identities = 119/162 (73%), Gaps = 12/162 (7%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAAT---TTTGAAGGTGTAC--ACCAATTGGGCTCTCTCAAACTTGCT 55 |||||||||||||||| || |||| | | | || | |||| || |||||| | Sbjct 710 GTGGCATATTTGTAATAAGAGTG-AGGTCTCCGGATCA---GAGCTCCCTTCAACTTGGT 655 Query 56 -GATTCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATC 114 | | |||||| | | ||| ||| | |||||||||||||||| |||| |||| ||| Sbjct 654 AAAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATC 596 Query 115 TTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| ||| |||||| ||||||| |||||||||||||| Sbjct 595 CAGTTCACACATGTGGCGTCCATCCGTTATAATATTACCGGA 554 >seq31733 Length=231 Score = 82.4 bits (90), Expect = 1e-12 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| | | ||| ||| | ||| |||||||||||| Sbjct 18 GCTCCCTTCAACTTGGTGAAATGAATTGGAG-ACTGGAGTACCATATGTACTAGAACCCT 76 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| |||| |||| ||||||||| ||||||| |||||||||||||| Sbjct 77 TAATAGCCTTATTGATCTAGTTCACACACGTGGCATCCATCCGTTATAATATTACCGGA 135 >seq152373 Length=717 Score = 80.6 bits (88), Expect = 4e-12 Identities = 119/160 (74%), Gaps = 8/160 (5%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAG-GTGTACACC-AAT-TGGGCTCTCTCAAACTTGCTG- 56 ||||||||||||||| | ||| | | | || ||| | |||| || |||||| || Sbjct 277 GTGGCATATTTGTAA--TAAAAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGA 220 Query 57 ATTCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTT 116 | | |||||| | | ||| ||| | ||||| |||||||||| |||| |||| ||| Sbjct 219 AATGAATTGGAG-ACTGGAGTACCATATATGCTAGAACCCTTAATAGCCTTATTGATCCA 161 Query 117 GTTCCTACACGTGGCGGCCATCC-GAATAATATTACCGGA 155 |||| |||||||||| |||||| |||||||||||||| Sbjct 160 GTTCACACACGTGGCGTCCATCCATTATAATATTACCGGA 121 >seq138025 Length=1256 Score = 80.6 bits (88), Expect = 4e-12 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| ||| Sbjct 491 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTGAA 433 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| || | |||| ||| | Sbjct 432 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATTGCCTTATTGATCCAG 374 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| ||||||||| ||||||| |||||||||||||| Sbjct 373 TTCACACACGTGGCATCCATCCGTTATAATATTACCGGA 335 >seq119080 Length=695 Score = 80.6 bits (88), Expect = 4e-12 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1 GTGGCATATTTGTAATTTTGAAGGTGTACACCAATT--GGGCTCTCTCAAACTTGCTGAT 58 |||||||||||||||| || | | | || | | | |||| || |||||| | | Sbjct 438 GTGGCATATTTGTAATAA-GAGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTTGGTAAA 380 Query 59 -TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTCTATAGAACTATTAATCTTG 117 | |||||| | | ||| ||| | |||||||||||||||| ||| |||| ||| | Sbjct 379 ATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATATCCTTATTGATCCAG 321 Query 118 TTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 ||| |||||||||| ||||||| |||||||||||||| Sbjct 320 TTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 282 >seq77810 Length=792 Score = 80.6 bits (88), Expect = 4e-12 Identities = 91/118 (77%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 40 CTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTC 98 ||| || |||||| ||| | |||||| || ||| ||| | |||||||||||||||| Sbjct 379 CTCCCTTCAACTTGGTGAAATGAATTGGA-TACTGGAGTACCATATATACTAGAACCCTT 437 Query 99 TATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| ||| |||||||||| ||||||| |||||||||||||| Sbjct 438 AATAGCCTTATTGATCCAGTTGACACACGTGGCGTCCATCCGTTATAATATTACCGGA 495 >seq74641 Length=903 Score = 78.8 bits (86), Expect = 2e-11 Identities = 92/119 (77%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 39 GCTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCT 97 |||| || |||||| ||| | |||||| || ||| ||| | |||||||||||| ||| Sbjct 422 GCTCCCTTCAACTTGGTGAAATGAATTGGA-TACTGGAGTACCATATATACTAGAA-CCT 479 Query 98 CTATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| |||| |||||||||| ||||||| |||||||||||||| Sbjct 480 TAATAGCCTTATTGATCCAGTTCACACACGTGGCGTCCATCCGTTATAATATTACCGGA 538 >seq2813 Length=1097 Score = 77.0 bits (84), Expect = 5e-11 Identities = 90/118 (76%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 40 CTCTCTCAAACTTGCTGAT-TCAATTGGTGTATTGGGGTAACTTATATACTAGAACCCTC 98 ||| || |||||| ||| | |||||| || ||| ||| | |||||||||||||||| Sbjct 725 CTCCCTTCAACTTGGTGAAATGAATTGGA-TACTGGAGTACCATATATACTAGAACCCTT 667 Query 99 TATAGAACTATTAATCTTGTTCCTACACGTGGCGGCCATCCG-AATAATATTACCGGA 155 |||| |||| ||| ||| ||||||| || ||||||| |||||||||||||| Sbjct 666 AATAGCCTTATTGATCCAGTTGACACACGTGTCGTCCATCCGTTATAATATTACCGGA 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8152556339136