Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_008780.1 Length=2586 Score E Sequences producing significant alignments: (Bits) Value seq118076 77.0 5e-11 >seq118076 Length=24012 Score = 77.0 bits (84), Expect = 5e-11 Identities = 116/159 (73%), Gaps = 16/159 (10%) Strand=Plus/Minus Query 2441 AACCGATGGCATTTTTGTAATAAGAAGTGTGTACCCCGGAT--GAGCT--CTCAAACTTC 2496 || ||||||||| ||||||||||| |||| | | ||| || ||||| || ||||| Sbjct 23250 AAACGATGGCATATTTGTAATAAG-AGTGAGGTCTCCGAATCAGAGCTCCCTTCAACTT- 23193 Query 2497 TGTGTTATGAATTGGGGTAATGGGTTACAATATATACTATAACCCTCA-----TTTACGG 2551 ||| ||||||| || || ||| ||| |||||||||| |||||| | ||| | Sbjct 23192 GGTGAAATGAATT-GGATACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTG 23134 Query 2552 AT----TTGCAACACGTGGCGGCCATCCGCTATAATATT 2586 || || |||||||||| ||||||| ||||||||| Sbjct 23133 ATCCAGTTCACACACGTGGCGTCCATCCGTTATAATATT 23095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8152556339136