Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_015628.1 Length=2553 Score E Sequences producing significant alignments: (Bits) Value seq100414 80.6 4e-12 >seq100414 Length=7639 Score = 80.6 bits (88), Expect = 4e-12 Identities = 88/113 (78%), Gaps = 3/113 (3%) Strand=Plus/Plus Query 2443 GCTCTCTCAAACTTGCTCAT-TCAATCGGTGA-AAGAGTGACAATATATACTAGAACCCT 2500 |||| || |||||| | | | ||| || || |||||| || ||||||||||||||||| Sbjct 6749 GCTCCCTTCAACTTGGTTAAATGAATTGGAGACAAGAGT-ACCATATATACTAGAACCCT 6807 Query 2501 CAATAGAACTTTCAATCGTGTTCGCACACGTGGCGGCCATCCGCTATAATATT 2553 ||||| | | ||| |||| ||||||||||| ||||||| ||||||||| Sbjct 6808 TAATAGCCTTATTGATCCAGTTCACACACGTGGCGTCCATCCGTTATAATATT 6860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8047135351992