Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_015961.1 Length=2605 Score E Sequences producing significant alignments: (Bits) Value seq118076 77.0 5e-11 >seq118076 Length=24012 Score = 77.0 bits (84), Expect = 5e-11 Identities = 116/155 (75%), Gaps = 15/155 (10%) Strand=Plus/Minus Query 2463 GGTGGCATTTTTGTAATAAGAGGGGTGTACACCGATT--GAGCTCCTCTCAAACTTGCTG 2520 |||||||| ||||||||||||| | ||| | |||| | ||||||| || |||||| || Sbjct 10113 GGTGGCATATTTGTAATAAGAGTGATGT-CTCCGAATCAGAGCTCC-CTTCAACTTGGTG 10056 Query 2521 -ATTGTATTGGTGTATTGGGGTAACTTATATACTAGAA-GGTTCAT----TAACGGATC- 2573 | || ||||| | | ||| ||| | |||||||||||| || || | | |||| Sbjct 10055 AAATGAATTGGAG-ACTGGAGTACCATATATACTAGAACCCTTAATAGCCTTATTGATCC 9997 Query 2574 --TTC-GACACGTGGCGGCCATCCGCTATAATATT 2605 ||| |||||||| ||||||||| ||||||||| Sbjct 9996 AGTTCACACACGTGGAGGCCATCCGTTATAATATT 9962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8213253271128