Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_016579.1 Length=2614 Score E Sequences producing significant alignments: (Bits) Value seq118076 77.0 5e-11 >seq118076 Length=24012 Score = 77.0 bits (84), Expect = 5e-11 Identities = 71/89 (80%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 2527 AATCGGTGTCTGGAGTCTCATTTATAGTAGAACCCTCAATAGAACTTTAGATCCTGTTCG 2586 ||| || | ||||||| ||| |||||||||||||| | ||| | | ||||| |||| Sbjct 3096 AATTGGAGACTGGAGTACCATATATAGTAGAACCCTTATTAGCCTTATTGATCCAGTTCA 3037 Query 2587 CACACCTGGCGGCCATCCG-TATAATATT 2614 ||||| ||||| ||||||| ||||||||| Sbjct 3036 CACACGTGGCGTCCATCCGTTATAATATT 3008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8242004449440