Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_017002.1 Length=2577 Score E Sequences producing significant alignments: (Bits) Value seq118076 87.8 3e-14 >seq118076 Length=24012 Score = 87.8 bits (96), Expect = 3e-14 Identities = 75/90 (83%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 2489 AATTGGTGACTGGTGTACAATATATAGTAGAAGCCTCTATCTGTCTAATT-ATCTCGTTC 2547 |||||| |||||| |||| ||||||||||||| ||| ||| | || ||| ||| |||| Sbjct 3096 AATTGGAGACTGGAGTACCATATATAGTAGAACCCT-TATTAGCCTTATTGATCCAGTTC 3038 Query 2548 ACCCACGTGGCGGCCATCCGCTATAATATT 2577 || ||||||||| ||||||| ||||||||| Sbjct 3037 ACACACGTGGCGTCCATCCGTTATAATATT 3008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8123805160824