Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_002510.1 Length=2764 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 9e-15 >seq12 Length=14929429 Score = 89.7 bits (98), Expect = 9e-15 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 2352 AGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTATTTGGGGAGACCAGGTCGAAGAG 2411 ||||| |||||||||||||||||||||||| |||||||||||| || | |||||||| Sbjct 10862398 AGCTCTTTGAATGTTTGGATGGAAATGTGCTAGCCTATTTGGGGATACTATGTCGAAGAA 10862457 Query 2412 TCTCTGATTTTGGCACTTGAACTTCCCTTCGAACTGGAGAAGCACATGTAGATGAGGTTG 2471 || ||| |||| | ||||| ||| || | | |||| |||||||||| Sbjct 10862458 TCATTGACTTTGTGTTTCAAACTTGTGAGGGAAGTGAAACAAAGCATGAAGATGAGGTTA 10862517 Query 2472 GCCATCCTCGTGAAGCTCT 2490 | ||| ||||| |||||| Sbjct 10862518 CCTATCTTCGTGTAGCTCT 10862536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8732559875290