Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_003828.1 Length=2773 Score E Sequences producing significant alignments: (Bits) Value seq12 77.0 6e-11 >seq12 Length=14929429 Score = 77.0 bits (84), Expect = 6e-11 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 2336 AGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAA 2395 ||||| |||||||| ||||||||||||||| ||| |||||||||| | ||||||||| Sbjct 10862398 AGCTCTTTGAATGTTTGGATGGAAATGTGCTAGCCTATTTGGGGATACTATGTCGAAGAA 10862457 Query 2396 TCGTTGA 2402 || |||| Sbjct 10862458 TCATTGA 10862464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8761359083380