Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_013017.1 Length=2386 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 3e-13 >seq12 Length=14929429 Score = 84.2 bits (92), Expect = 3e-13 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1974 AGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTATTTGGGGAGACCAGGTCGAATAG 2033 ||||| |||||||||||||||||||||||| |||||||||||| || | |||||| | Sbjct 10862398 AGCTCTTTGAATGTTTGGATGGAAATGTGCTAGCCTATTTGGGGATACTATGTCGAAGAA 10862457 Query 2034 TCTCTGATTTTGGCACTTGAACTTCCCTTCGAATTGGAGAAGCACATGCAGATGAGGTTG 2093 || ||| |||| | ||||| ||| || | | |||| |||||||||| Sbjct 10862458 TCATTGACTTTGTGTTTCAAACTTGTGAGGGAAGTGAAACAAAGCATGAAGATGAGGTTA 10862517 Query 2094 GCCATCCTCGTGAAGCTCT 2112 | ||| ||||| |||||| Sbjct 10862518 CCTATCTTCGTGTAGCTCT 10862536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7526198960448