Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20trichocarpa_20[refseq_20GCF_5F000002775.3_202013-10-18] 2,514 sequences; 417,286,671 total letters Query= NC_033554.1 Length=2738 Score E Sequences producing significant alignments: (Bits) Value seq12 80.6 5e-12 >seq12 Length=14929429 Score = 80.6 bits (88), Expect = 5e-12 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 2308 AGCTCCCTGTATGTTTGGATGGAAATGTGCTGACCTATTTGGGGATACCAGGTCGAAGAA 2367 ||||| || ||||||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct 10862398 AGCTCTTTGAATGTTTGGATGGAAATGTGCTAGCCTATTTGGGGATACTATGTCGAAGAA 10862457 Query 2368 TC 2369 || Sbjct 10862458 TC 10862459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8652568872896