Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_008492.1 Length=2606 Score E Sequences producing significant alignments: (Bits) Value seq30 89.7 8e-15 seq882 80.6 4e-12 >seq30 Length=1365002 Score = 89.7 bits (98), Expect = 8e-15 Identities = 83/101 (82%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 2382 TTGGGAAAGTGCTTCTTCTTTAGTAAGAGAGCACTGGGGGTATGTGAGGAA-ATAGTTTT 2440 |||||||||||||||||| || | |||||| |||||| ||||||||||||| ||| |||| Sbjct 228501 TTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAGGAATATA-TTTT 228443 Query 2441 TGGCTTTGATTGAGAAAGAACCC--TTTCGTGGCATATTTG 2479 || |||| || ||| ||| | ||||||||||| |||| Sbjct 228442 TG--TTTGCAAGACAAAAAACTCTGTTTCGTGGCATGTTTG 228404 >seq882 Length=164761 Score = 80.6 bits (88), Expect = 4e-12 Identities = 81/101 (80%), Gaps = 6/101 (6%) Strand=Plus/Plus Query 2382 TTGGGAAAGTGCTTCTTCTTTAGTAAGAGAGCACTGGGGGTATGTGAGGAA-ATAGTTTT 2440 |||||||||||||||||| || | |||||| |||||| ||||||||||||| ||| |||| Sbjct 58317 TTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAGGAATATA-TTTT 58375 Query 2441 TGGCTTTGATTGAGAAAGAAC--CCTTTCGTGGCATATTTG 2479 || |||| || || ||| ||||||||||| |||| Sbjct 58376 TG--TTTGCAAGACGAAAAACTTTGTTTCGTGGCATGTTTG 58414 Score = 80.6 bits (88), Expect = 4e-12 Identities = 81/101 (80%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 2382 TTGGGAAAGTGCTTCTTCTTTAGTAAGAGAGCACTGGGGGTATGTGAGGAA-ATAGTTTT 2440 |||||||||||||||||| || | |||||| |||||| ||||||||||||| ||| |||| Sbjct 100367 TTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAGGAATATA-TTTT 100309 Query 2441 TGGCTTTGATTGAGAAAGAAC--CCTTTCGTGGCATATTTG 2479 || |||| || || ||| ||||||||||| |||| Sbjct 100308 TG--TTTGCAAGACGAAAAACTTTGTTTCGTGGCATGTTTG 100270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8230209188464