Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_008492.1
Length=2606
Score E
Sequences producing significant alignments: (Bits) Value
seq30 89.7 8e-15
seq882 80.6 4e-12
>seq30
Length=1365002
Score = 89.7 bits (98), Expect = 8e-15
Identities = 83/101 (82%), Gaps = 6/101 (6%)
Strand=Plus/Minus
Query 2382 TTGGGAAAGTGCTTCTTCTTTAGTAAGAGAGCACTGGGGGTATGTGAGGAA-ATAGTTTT 2440
|||||||||||||||||| || | |||||| |||||| ||||||||||||| ||| ||||
Sbjct 228501 TTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAGGAATATA-TTTT 228443
Query 2441 TGGCTTTGATTGAGAAAGAACCC--TTTCGTGGCATATTTG 2479
|| |||| || ||| ||| | ||||||||||| ||||
Sbjct 228442 TG--TTTGCAAGACAAAAAACTCTGTTTCGTGGCATGTTTG 228404
>seq882
Length=164761
Score = 80.6 bits (88), Expect = 4e-12
Identities = 81/101 (80%), Gaps = 6/101 (6%)
Strand=Plus/Plus
Query 2382 TTGGGAAAGTGCTTCTTCTTTAGTAAGAGAGCACTGGGGGTATGTGAGGAA-ATAGTTTT 2440
|||||||||||||||||| || | |||||| |||||| ||||||||||||| ||| ||||
Sbjct 58317 TTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAGGAATATA-TTTT 58375
Query 2441 TGGCTTTGATTGAGAAAGAAC--CCTTTCGTGGCATATTTG 2479
|| |||| || || ||| ||||||||||| ||||
Sbjct 58376 TG--TTTGCAAGACGAAAAACTTTGTTTCGTGGCATGTTTG 58414
Score = 80.6 bits (88), Expect = 4e-12
Identities = 81/101 (80%), Gaps = 6/101 (6%)
Strand=Plus/Minus
Query 2382 TTGGGAAAGTGCTTCTTCTTTAGTAAGAGAGCACTGGGGGTATGTGAGGAA-ATAGTTTT 2440
|||||||||||||||||| || | |||||| |||||| ||||||||||||| ||| ||||
Sbjct 100367 TTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAGGAATATA-TTTT 100309
Query 2441 TGGCTTTGATTGAGAAAGAAC--CCTTTCGTGGCATATTTG 2479
|| |||| || || ||| ||||||||||| ||||
Sbjct 100308 TG--TTTGCAAGACGAAAAACTTTGTTTCGTGGCATGTTTG 100270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8230209188464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |