Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_008794.1 Length=2745 Score E Sequences producing significant alignments: (Bits) Value seq882 77.0 6e-11 seq30 77.0 6e-11 >seq882 Length=164761 Score = 77.0 bits (84), Expect = 6e-11 Identities = 61/72 (85%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 2496 TAGGGCTTTAATTTGGGAAAGTGCTTCCTCTTTGGTAAGAGAACAGTGTGGGTATGTGAG 2555 ||||| ||||| ||||||||||||||| || || | ||||||||| || |||||||||| Sbjct 58305 TAGGGATTTAAGTTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAG 58364 Query 2556 GAA-ATAGTTTT 2566 ||| ||| |||| Sbjct 58365 GAATATATTTTT 58376 Score = 77.0 bits (84), Expect = 6e-11 Identities = 61/72 (85%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 2496 TAGGGCTTTAATTTGGGAAAGTGCTTCCTCTTTGGTAAGAGAACAGTGTGGGTATGTGAG 2555 ||||| ||||| ||||||||||||||| || || | ||||||||| || |||||||||| Sbjct 100379 TAGGGATTTAAGTTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAG 100320 Query 2556 GAA-ATAGTTTT 2566 ||| ||| |||| Sbjct 100319 GAATATATTTTT 100308 >seq30 Length=1365002 Score = 77.0 bits (84), Expect = 6e-11 Identities = 61/72 (85%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 2496 TAGGGCTTTAATTTGGGAAAGTGCTTCCTCTTTGGTAAGAGAACAGTGTGGGTATGTGAG 2555 ||||| ||||| ||||||||||||||| || || | ||||||||| || |||||||||| Sbjct 228513 TAGGGATTTAAGTTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAG 228454 Query 2556 GAA-ATAGTTTT 2566 ||| ||| |||| Sbjct 228453 GAATATATTTTT 228442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8674998876332