Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_008794.1
Length=2745
Score E
Sequences producing significant alignments: (Bits) Value
seq882 77.0 6e-11
seq30 77.0 6e-11
>seq882
Length=164761
Score = 77.0 bits (84), Expect = 6e-11
Identities = 61/72 (85%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 2496 TAGGGCTTTAATTTGGGAAAGTGCTTCCTCTTTGGTAAGAGAACAGTGTGGGTATGTGAG 2555
||||| ||||| ||||||||||||||| || || | ||||||||| || ||||||||||
Sbjct 58305 TAGGGATTTAAGTTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAG 58364
Query 2556 GAA-ATAGTTTT 2566
||| ||| ||||
Sbjct 58365 GAATATATTTTT 58376
Score = 77.0 bits (84), Expect = 6e-11
Identities = 61/72 (85%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 2496 TAGGGCTTTAATTTGGGAAAGTGCTTCCTCTTTGGTAAGAGAACAGTGTGGGTATGTGAG 2555
||||| ||||| ||||||||||||||| || || | ||||||||| || ||||||||||
Sbjct 100379 TAGGGATTTAAGTTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAG 100320
Query 2556 GAA-ATAGTTTT 2566
||| ||| ||||
Sbjct 100319 GAATATATTTTT 100308
>seq30
Length=1365002
Score = 77.0 bits (84), Expect = 6e-11
Identities = 61/72 (85%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 2496 TAGGGCTTTAATTTGGGAAAGTGCTTCCTCTTTGGTAAGAGAACAGTGTGGGTATGTGAG 2555
||||| ||||| ||||||||||||||| || || | ||||||||| || ||||||||||
Sbjct 228513 TAGGGATTTAAGTTGGGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAG 228454
Query 2556 GAA-ATAGTTTT 2566
||| ||| ||||
Sbjct 228453 GAATATATTTTT 228442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8674998876332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |