Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_010952.1 Length=2605 Score E Sequences producing significant alignments: (Bits) Value seq30 77.0 5e-11 >seq30 Length=1365002 Score = 77.0 bits (84), Expect = 5e-11 Identities = 191/278 (69%), Gaps = 14/278 (5%) Strand=Plus/Minus Query 2208 GATGGAAATGTGTTGACCTACTTGGGGACACCAGATCGAACAATCTGTTATTCGTGCAGT 2267 ||||||| ||||||||||| || |||||||| ||||| ||||| | || | || | Sbjct 228675 GATGGAAGTGTGTTGACCTGGTTCTGGACACCAAGTCGAAGAATCTTTGAT-CTTGTGTT 228617 Query 2268 T-GAATTTCCCTTGG-AACTGGATGAGGAC-GTGGAGATGAGGCTGCCCATCTTCGTGGA 2324 | ||| | | || || | || | ||| |||||||| ||| || ||||| ||||| | Sbjct 228616 TCGAAA--CGGTAGGGAAATTGAAGCAGACAGTGGAGATAAGGTTGGCCATCCTCGTGCA 228559 Query 2325 ACTCTCTGCAGATTTTGATGAATTTCTTGTTAACCGGAGTGTT--TAGGTTTGTTAATTG 2382 || | | | | ||| | | | | || ||| |||| | | | ||| Sbjct 228558 GTTCAGAGGACACTCGTATGTGTATGAGGGTGGTCGTGTTGTGAATAGGGATTTAAGTTG 228499 Query 2383 GGAAAGTGCTTCTTCTTTGGTAAGAGAGCACTGAGGATATGTGAGGAA-ATAGTTTTTGG 2441 ||||||||||||||| || | |||||| ||||| | ||||||||||| ||| |||||| Sbjct 228498 GGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAGGAATATA-TTTTTG- 228441 Query 2442 CTTTTATGGAGAAAGAACCC--TTTCGTGGCATTTTTG 2477 ||| || ||| ||| | ||||||||||| |||| Sbjct 228440 -TTTGCAAGACAAAAAACTCTGTTTCGTGGCATGTTTG 228404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8227009262652