Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_010952.1
Length=2605
Score E
Sequences producing significant alignments: (Bits) Value
seq30 77.0 5e-11
>seq30
Length=1365002
Score = 77.0 bits (84), Expect = 5e-11
Identities = 191/278 (69%), Gaps = 14/278 (5%)
Strand=Plus/Minus
Query 2208 GATGGAAATGTGTTGACCTACTTGGGGACACCAGATCGAACAATCTGTTATTCGTGCAGT 2267
||||||| ||||||||||| || |||||||| ||||| ||||| | || | || |
Sbjct 228675 GATGGAAGTGTGTTGACCTGGTTCTGGACACCAAGTCGAAGAATCTTTGAT-CTTGTGTT 228617
Query 2268 T-GAATTTCCCTTGG-AACTGGATGAGGAC-GTGGAGATGAGGCTGCCCATCTTCGTGGA 2324
| ||| | | || || | || | ||| |||||||| ||| || ||||| ||||| |
Sbjct 228616 TCGAAA--CGGTAGGGAAATTGAAGCAGACAGTGGAGATAAGGTTGGCCATCCTCGTGCA 228559
Query 2325 ACTCTCTGCAGATTTTGATGAATTTCTTGTTAACCGGAGTGTT--TAGGTTTGTTAATTG 2382
|| | | | | ||| | | | | || ||| |||| | | | |||
Sbjct 228558 GTTCAGAGGACACTCGTATGTGTATGAGGGTGGTCGTGTTGTGAATAGGGATTTAAGTTG 228499
Query 2383 GGAAAGTGCTTCTTCTTTGGTAAGAGAGCACTGAGGATATGTGAGGAA-ATAGTTTTTGG 2441
||||||||||||||| || | |||||| ||||| | ||||||||||| ||| ||||||
Sbjct 228498 GGAAAGTGCTTCTTCCTTCGAAAGAGAACACTGGTGGTATGTGAGGAATATA-TTTTTG- 228441
Query 2442 CTTTTATGGAGAAAGAACCC--TTTCGTGGCATTTTTG 2477
||| || ||| ||| | ||||||||||| ||||
Sbjct 228440 -TTTGCAAGACAAAAAACTCTGTTTCGTGGCATGTTTG 228404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8227009262652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |