Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_002543.1 Length=3080 Score E Sequences producing significant alignments: (Bits) Value seq941 361 1e-96 >seq941 Length=10723577 Score = 361 bits (400), Expect = 1e-96 Identities = 445/608 (73%), Gaps = 0/608 (0%) Strand=Plus/Minus Query 624 TATGATGATATGCTTGGTGCTGGTGGATTGGGTTCTACCATTAGCAATAATGGTATGATT 683 || |||||| | | |||| | |||| | || ||||| || || ||| |||||||||| Sbjct 3598678 TACGATGATTTCTTCGGTGGTTCTGGAGTTGGATCTACTATCAGTAATGATGGTATGATC 3598619 Query 684 ACTATGTTGAATAATTATGTCCAGGGTATTGGAGATAGTCAACGGTCTACTAACACGACT 743 || ||| ||||||||||||| || ||| | || || ||||||||||| | |||| ||| Sbjct 3598618 ACGATGGTGAATAATTATGTTCACGGTCTCGGGGACAGTCAACGGTCAAGTAACGTGACC 3598559 Query 744 ATTACGAAGCATATGAAGTTTGATATGGCGCTAATGGGCAGTTCTAGTTTTTGGGATACT 803 |||| ||| ||||| | |||||||| | ||||| ||||| | || ||| | | Sbjct 3598558 GTTACACGACATTTGAAGATGGATATGGCATTGATGGGAAGTTCAAAATTCTGGATGAGT 3598499 Query 804 CCAAATTACATGACTCAATATCATTGGATTATCATAGACAAGGATGTTGGTTCGGTGTTT 863 || ||||| ||||| |||||||||||| |||| | ||| ||| || ||| | ||| Sbjct 3598498 CCTAATTATATGACGCAATATCATTGGCTTATTGTCGACCGGGACGTGGGTGCTACATTT 3598439 Query 864 CCTGTTAAGTTGGATGATATATTTGATATTCCATCAAATGGTCAAGCTATGCCTTCTACT 923 ||| ||| || || |||||||||||||| || ||| || || || || ||| Sbjct 3598438 CCTCTTAGCCTGAGCGAGATATTTGATATTCCGTCTGGTGGACAGACTGCTCCGTCCACT 3598379 Query 924 TTCCGCATTAGGAGAGATAGTAATGAGAGGTTTATTGTGAAGAGGAAGTGGACTACACAT 983 | || || | || ||| |||||||| | || || || ||||| ||||| || ||| Sbjct 3598378 TATCGTATCCGCAGGGATTGTAATGAGCGTTTCATCGTCAAGAGACGATGGACGACTCAT 3598319 Query 984 TTAATGTCTACTGGAGCAGCTTATGGTAGCAAGGATATTTACAAGGGTCCTTCTATGCCT 1043 || ||||| || || ||||||| | ||| | || |||| || || ||||| Sbjct 3598318 TTGATGTCAACAGGTTGCCCTTATGGGAATTCGGAGACGTATAAGGCACCGTCGATGCCG 3598259 Query 1044 AATTACAAGAAGGGTATGAACATCAATATTCGCAACTTGAATGTGAAGACTATATGGAAG 1103 ||||||||||||| |||||| |||| ||||| || | ||||| ||||| | |||||| Sbjct 3598258 AATTACAAGAAGGCTATGAATCTCAACATTCGGAATATCAATGTCAAGACCTTGTGGAAG 3598199 Query 1104 GATACTGGTGGCGGGAAATACGAAGATGTTAAGGAGAATGCTATACTTTATATTGTTGTT 1163 ||||| ||||| || || ||||| || |||||||||||||| ||||| ||| | ||||| Sbjct 3598198 GATACGGGTGGTGGAAAGTACGAGGACGTTAAGGAGAATGCGATACTGTATGTAGTTGTC 3598139 Query 1164 AATGATAATGCCGATAATACTAATATGTATGCTACATTATTTGGCAATTGCCGATGTTAT 1223 |||||||| ||| | ||| || ||||| |||| |||||||| ||||| |||||||| Sbjct 3598138 AATGATAACAGCGACAGTACGAACATGTACGCTATGTTATTTGGAAATTGTAGATGTTAT 3598079 Query 1224 TTTTATTA 1231 || ||||| Sbjct 3598078 TTCTATTA 3598071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9743895663075