Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_014631.1 Length=3065 Score E Sequences producing significant alignments: (Bits) Value seq941 360 4e-96 >seq941 Length=10723577 Score = 360 bits (398), Expect = 4e-96 Identities = 455/622 (73%), Gaps = 10/622 (2%) Strand=Plus/Minus Query 711 TGGTGTTGGTTCTGCCATCACAAATGATGGTATGATTACTATGCTGAACAACTATGTTCA 770 ||| ||||| ||| | |||| |||||||||||||| || ||| |||| || |||||||| Sbjct 3598655 TGGAGTTGGATCTACTATCAGTAATGATGGTATGATCACGATGGTGAATAATTATGTTCA 3598596 Query 771 GGGCATTGGTGATTCTCAAAGATCATCCAATGTGACTGTTACAAGGCATTTGAAGTATGA 830 || | || || |||| | ||| || ||||| |||||| | ||||||||| || Sbjct 3598595 CGGTCTCGGGGACAGTCAACGGTCAAGTAACGTGACCGTTACACGACATTTGAAGATGGA 3598536 Query 831 CATGGCATTAATGGGTAGCACAGGTTTTTGGGAGGCTCCTAATTATATGACTCAATATCA 890 |||||||| ||||| || || || ||| | ||||||||||||||| |||||||| Sbjct 3598535 TATGGCATTGATGGGAAGTTCAAAATTCTGGATGAGTCCTAATTATATGACGCAATATCA 3598476 Query 891 TTGGATCATTGTTGACCGTGATGTTGGTTCTGTTTTTCCAGATAAGCTTAGTATGATTTT 950 |||| | ||||| ||||| || || ||| || ||||| || || || ||| || Sbjct 3598475 TTGGCTTATTGTCGACCGGGACGTGGGTGCTACATTTCCTCTTAGCCTGAGCGAGATATT 3598416 Query 951 TGATATTCCCTCCAACGGCCAAGCCATGCCTTCTACTTATCGCATCCGGAGGGACATGAA 1010 ||||||||| || || || | || || |||||||| ||||| ||||| || Sbjct 3598415 TGATATTCCGTCTGGTGGACAGACTGCTCCGTCCACTTATCGTATCCGCAGGGATTGTAA 3598356 Query 1011 TGAGCGGTTCATTGTTAAAAAGAAATGGACCACTCATCTCATGTCTACAGGTACTGATTA 1070 |||||| ||||| || || | |||||| |||||| | ||||| |||||| ||| Sbjct 3598355 TGAGCGTTTCATCGTCAAGAGACGATGGACGACTCATTTGATGTCAACAGGTTGCCCTTA 3598296 Query 1071 TGGTGGGAA---GCAGACTTACAAGGCTCCATCTATGCCTAATTATAAGAAGCCTCTCAA 1127 ||| ||| | |||| || ||||| || || ||||| ||||| |||||| || | || Sbjct 3598295 TGG---GAATTCGGAGACGTATAAGGCACCGTCGATGCCGAATTACAAGAAGGCTATGAA 3598239 Query 1128 TGTCAATGTTAGGAATATCAATGTTAAGACGGTATGGAAGGACACTGGAGGTGGAAAGTA 1187 | |||| || ||||||||||||| ||||| | |||||||| || || ||||||||||| Sbjct 3598238 TCTCAACATTCGGAATATCAATGTCAAGACCTTGTGGAAGGATACGGGTGGTGGAAAGTA 3598179 Query 1188 TGAAGATGTGAAGGAAAATGCTATATTATATGTTGTTGTCAACGATAATACAGATAACAC 1247 || || || ||||| ||||| ||| | ||||| |||||||| ||||| | || | || Sbjct 3598178 CGAGGACGTTAAGGAGAATGCGATACTGTATGTAGTTGTCAATGATAACAGCGACAGTAC 3598119 Query 1248 AAATATGTATGCCACTTTATATGGCAATTGTAGATGTTATTTTTATTGATAGaaaaaaaT 1307 || ||||| || | |||| ||| ||||||||||||||||| ||| ||| |||| | Sbjct 3598118 GAACATGTACGCTATGTTATTTGGAAATTGTAGATGTTATTTCTAT---TAG-AAAATGT 3598063 Query 1308 TTTTCCAATGAGATTGTAGTTT 1329 || ||||||| ||| |||| Sbjct 3598062 TTAGCCAATGATGTTGATGTTT 3598041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9695896177050