Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_000869.1 Length=2751 Score E Sequences producing significant alignments: (Bits) Value seq19028 262 7e-67 >seq19028 Length=31091 Score = 262 bits (290), Expect = 7e-67 Identities = 261/337 (77%), Gaps = 1/337 (0%) Strand=Plus/Plus Query 1785 TTCTTTTCCTCTTCCAAGTACTCTTTATAGCTGGAGTTTGGTCCAGGATTGCAGAGGAAG 1844 || |||||||| || | | |||||||||||||||| | || ||||||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1845 ATAGTGGGAATTCCGCCTTTAATTTGAACTGGTTTGCCGTATTTGGTGTTGCTTTGCCAG 1904 || || || || || || || || | || || | |||||||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1905 TCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTTAGATAATGCGGATCGACGTCATCG 1964 | |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1965 ATGACGTTGAACCACGCATCATTATTATACACTTTTGGACTTAAATCTAAATGGCCACAC 2024 |||| ||| |||| |||| ||| ||| | ||| | | ||||||||||| || || Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 2025 AGATAATTATGTGGTCCCAATGACCTAGCCCACATCGTCTTCCCTGTTCTGCTATCACCC 2084 || |||||||||||||| || || || |||||| |||||||||||||| |||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 2085 TCAATGACTATAGTTATTGGTC-TCAATGGCCGCGCA 2120 |||||||| ||| | | |||| | |||||||||||| Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCA 14164 Score = 239 bits (264), Expect = 8e-60 Identities = 284/382 (74%), Gaps = 5/382 (1%) Strand=Plus/Plus Query 1096 CATACTGAAAATGCTTTGTTGTTATATATGGCATGTACTCATGCCTCTAACCCTGTGTAT 1155 |||||||||||||| ||||||| |||| | |||||||| ||||| ||||| ||| Sbjct 13084 CATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1156 GCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAAT 1215 |||| ||| | | |||||||| ||||| || | |||||||||||||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1216 TTTATATCATGTTCTTCAATTACATCAATTGTTCCTTCTAATACATTGTACAATACATGA 1275 ||||| ||||| | ||||| |||||| | |||| || | ||||||| | ||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1276 GATATTGCCCTAATTACATTGTTTATACTAATCACGCCTAATCTATTTAAATATTT-ATT 1334 || || ||||| | |||||| |||||||| || ||||||| | |||| |||| ||| Sbjct 13261 TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATT 13320 Query 1335 ACATTGATATTTAAATACTCTTAAGAAACGCGAGGTCTGAGGATGTAAATGAGTCCAGAT 1394 ||| || |||||||||||||||||||| | ||| ||||| ||||| |||||| ||| Sbjct 13321 ACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1395 TTTGCAGGCTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAACTG 1454 ||| || || ||| |||||| | || | ||||||||||||| |||||| | Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1455 GATTTGTAACGTGATTATGTCG 1476 ||||||| |||||||||| Sbjct 13440 AATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8691270880006