Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_000882.1 Length=2744 Score E Sequences producing significant alignments: (Bits) Value seq19028 244 2e-61 >seq19028 Length=31091 Score = 244 bits (270), Expect = 2e-61 Identities = 287/387 (74%), Gaps = 1/387 (0%) Strand=Plus/Plus Query 1601 GATGGTGACGAAGATTGCATTCTTTAGAGCCCAATTTTTAAGTGCGGTGTTCTTTTCCTC 1660 ||||||| ||| |||||| | | || ||||||||| | | | || |||||||| Sbjct 13779 GATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTC 13838 Query 1661 TTCCAAGAACTCTTTATAGCTTGAATGTGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1720 || | ||||||||||||||| ||| || || |||||||| | |||||| || || || Sbjct 13839 CTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTAT 13898 Query 1721 TCCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCTCTTTGGGC 1780 || || || || | || ||| ||||||| ||| ||||| ||| | |||||||| Sbjct 13899 CCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGC 13958 Query 1781 CCCCATGAATTCTTTAAAATGCTTTAAGTAATGCGGATCGACGTCATCAATGACGTTATA 1840 |||||| || |||||||| ||||||| |||||||||||||||| |||||||| |||||| Sbjct 13959 CCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATA 14018 Query 1841 CCAAGGGTCGTTGTTGTACACTTTTGGGCTTAAGTCTAAATGACCACATAAATAGTTATG 1900 ||| | | || || | ||| | || ||||||||||| |||| || ||||| Sbjct 14019 CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATG 14078 Query 1901 TGGTCCTAACGACCTGGCCCACATTGTTTTCCCCGTCCTGCTATCACCCTCTACCACTAT 1960 ||||||||| || || |||||| ||| ||||| || || |||||||| | || || Sbjct 14079 TGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAAT 14138 Query 1961 ACTTATCGGTC-TTAATGGCCGCGCAG 1986 ||| | |||| ||||||||||||||| Sbjct 14139 ACTCTTGGGTCGTTAATGGCCGCGCAG 14165 Score = 159 bits (176), Expect = 6e-36 Identities = 276/388 (71%), Gaps = 15/388 (4%) Strand=Plus/Plus Query 957 TCACACAGAGAATGCGCTTTTATTGTATATGGCATGTACGCATGCCAGTAATCCAGTGTA 1016 ||| || || ||||| || |||||||| | || ||||| |||||| || || Sbjct 13083 TCATACTGAAAATGCA---TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1017 TGCAACTTTGAAGATCA-GAATCTACTTCTACGACTCTGTACAAAATTAATAAATATTGA 1075 | ||| ||| || || | | || || || || |||| ||||||||||||||||| Sbjct 13140 TTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGA 13198 Query 1076 ATTTTATCATTTCTGAAAGACGAG--CATCAATGGTGCCCTCCAATACATTGTACAATAC 1133 ||||||| || ||| | | || |||| | || ||| | ||||||| | ||||| Sbjct 13199 ATTTTAT--TTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1134 AT-GTCTAATCGCCCTAATTACATTGTTTATACTAATCACTCCTAAATGGTCTAAATACT 1192 || ||||| || ||||| | |||||| |||||||| || ||||| |||||||| | | Sbjct 13257 ATTGTCTACA-GCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1193 TGAT-ACATTGATATTTAAATACTCTTAAGAAACGCGAGGTCTGAGGATGTAAACGAGTC 1251 | || ||| || |||||||||||||||||||| | ||| ||||| ||||||||||| Sbjct 13316 TCATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1252 CAAATTTGGCAGATTA-GAAAGCATTGGTGTAGTCCCCCCGCTTTCCTCAGGTTGTAGTT 1310 | || | | || | | |||||| || ||| || | | ||||||||||||| ||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGC-TTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTT 13433 Query 1311 GAACTGGATTTGCACCGTGATTATGTCG 1338 ||| | ||||| | |||||||||| Sbjct 13434 GAATCGAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8668878941780