Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001359.1 Length=2631 Score E Sequences producing significant alignments: (Bits) Value seq19028 215 9e-53 >seq19028 Length=31091 Score = 215 bits (238), Expect = 9e-53 Identities = 545/820 (66%), Gaps = 43/820 (5%) Strand=Plus/Plus Query 1553 TATTTTTCTCTTCGCTGAGGTAGTCTTTATAGGAAGACTGGGGGCCCGGATTGCAAAGAA 1612 ||||||| || || |||| | ||||||||| || || || |||||||| | | Sbjct 13826 TATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGA 13885 Query 1613 AGATAGTGGGTATCCCACCTTTAATTTGAATTGGTTTGCCGTATTTGCAGTTTGATTG-C 1671 |||| || ||||||||||| || || | | || | |||||||| | ||| | | | Sbjct 13886 AGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGAC 13944 Query 1672 CAATCCCGTTGGGCCCCCATAAACTCTTTAAAGTGCTTAACATAATGCGGAGGGATGTCA 1731 |||| | |||||||||||||||||||||||||||||| | |||||||||| || || | Sbjct 13945 CAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTA 14004 Query 1732 TCAATGACGTTATACCATGCATTATTGGAGTAGATTTTTGGGCTGAGATCCATATGACCA 1791 ||||||| ||||||||| |||||||| || || ||||| | | ||| | |||||| Sbjct 14005 TCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCG 14064 Query 1792 CATATGTAATTGTGTGGGCCGAGACTTCGGGCCCATAATGTTTTGCCTGTCCGTGAAGGA 1851 |||| |||||| ||||| || | | || ||||| ||| || ||||| | || | Sbjct 14065 CATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCA 14124 Query 1852 CCCTCGACCACTAATGACAAT-------GGTC-TCATTGGCCGCGCAGCGGCATCACATA 1903 ||||| ||||||||| |||| | | |||||||||||||||||| | | Sbjct 14125 CCCTC-------AATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAA 14177 Query 1904 CATTATCAGACACCCATTGTGTCATTATTGCAGGCACATTATTAAAGGACGCCTGTTGAA 1963 |||| |||| |||| ||| || ||| || ||||| | || Sbjct 14178 CATTTTCAGCTGCCCA-------------GCACTCA-ATTGTTGAAGGAAGAACAACTAA 14223 Query 1964 ATGGAGGAACCCACGGTTCCGGGGGAGTTTGGAATATCCGATTAGCGTTTGACACAATGT 2023 | ||| ||| | ||||| || || | |||||| |||| |||| || || | Sbjct 14224 AAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATAT 14283 Query 2024 TATGAAATTGGAGGAAGAAA---TGCTGAGGTTGTTCTTCCTTTATGATCTGCAGAGCTT 2080 ||||| ||| || ||||| |||| || || ||| | || || || |||| Sbjct 14284 TATGATATT-GAAATAGAAACTTTGCT--GGCATTTTTTCTCTAATAATAGAAAGCGCTT 14340 Query 2081 CTTCTGCAGATGCTGAATTTAACGCCTTAGCATATGTGTCATTAGCAGACTGCTGTCCTC 2140 |||| |||| | | ||||||| | ||| || ||||| | | || |||| Sbjct 14341 CTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTC 14400 Query 2141 CTCTAGCAGATCTGCCGTCTATTTGGAATTCTCCCCATTCTACGGTATCGCCGTCTTTGT 2200 |||||||||||| || || ||||| || | ||||| || | ||| | |||||| Sbjct 14401 CTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCG 14460 Query 2201 CGATGTACGTCTTGACGTCGGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTG 2260 ||||||| |||| || || || ||||||||| || | ||| || ||| ||||| Sbjct 14461 CGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTG 14519 Query 2261 CTGATCTGGTA-GAGGAT--ACGAGGTCAAAGAATCGGTTGTTCGTGCATTGGTATTTTC 2317 || || ||| ||||| | || || ||| || ||| | |||| || | Sbjct 14520 GTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGC 14577 Query 2318 CTTCGAACTGAATAAGCACGTGCAGATGAGGTTGCCCATC 2357 ||||||| |||||||| | || |||| || |||||| Sbjct 14578 CTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATC 14617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8307409081846