Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001412.1 Length=2994 Score E Sequences producing significant alignments: (Bits) Value seq19028 100 5e-18 >seq19028 Length=31091 Score = 100 bits (110), Expect = 5e-18 Identities = 141/195 (72%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 2184 CTTTAAGTAAGTGGGATCTACGTCATCAATGACGTTGTATTCCA--CTTCATCATAATAC 2241 ||||| ||| ||||| |||| |||||||| ||| || ||| | | || |||| Sbjct 13980 CTTTAGATAATGCGGATCGACGTTATCAATGATGTTATA--CCAGGCATTATTTGAATAA 14037 Query 2242 GTTCTAGGGCTAAAATCTAAGTGCCCTGTGATGTAATTGTGGGCCCCTAAAGATCTAGCC 2301 || || | |||||||| || || | |||||| || | ||||||||||| ||| Sbjct 14038 ATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCC 14097 Query 2302 CACATAGTCTTCCCTGTTCTTGAATCACCCTCTACTATGATACTATTATATC-TTAAAGG 2360 ||| |||||||||||||| || |||||||| | | ||||| || || |||| || Sbjct 14098 CACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGG 14157 Query 2361 CCGCGCAGCGGCATC 2375 ||||||||||||||| Sbjct 14158 CCGCGCAGCGGCATC 14172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9465291942755