Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001467.1 Length=2779 Score E Sequences producing significant alignments: (Bits) Value seq19028 453 2e-124 >seq19028 Length=31091 Score = 453 bits (502), Expect = 2e-124 Identities = 1026/1536 (67%), Gaps = 106/1536 (7%) Strand=Plus/Plus Query 1151 ACTCATGCCTCCAATCCTGTATATGCGACGTTGAAAATACGTATATACTTCTATGACAGT 1210 |||||||| || |||||||||||| || ||| || ||| | || || ||||| ||| Sbjct 13117 ACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGT 13176 Query 1211 ATTGGCAATTAATAAACATTGAATTTTATTTCATGAG--TCAACTTGCACTCAATAGTGT 1268 | |||||||||| ||||||||||||||||||| |||| | || || | || | Sbjct 13177 GTATCAAATTAATAAATATTGAATTTTATTTCATGATATTCAAGTA-CATCCACT-GTTT 13234 Query 1269 TGGCAATTACATTGAACAAAACATGATCAGCAGCTCTAATTACATTGTTAATTGAGATAA 1328 ||||||||||||| || |||| || |||||||||| | ||||||||| |||| Sbjct 13235 GCTCAATTACATTGAATAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAA 13294 Query 1329 CACCTATATTATCCAAGTATTTAATTACTTGGTATCTAAAGACCCTTAAGAAAAGACCAG 1388 |||||| || || |||| ||||| | || |||| || |||||||||| | Sbjct 13295 CACCTAATCGGTCTAAAAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATG 13354 Query 1389 TCTGAGGCTGTAAGGTTGTCCAGATCTGGAAGTTGAGAAAACATTTGTGAATCCCCAGCT 1448 || |||| |||| |||| ||||| ||||||||| ||| |||||||| ||| | Sbjct 13355 TCGGAGGACGTAAACGAGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTT 13414 Query 1449 CCTTCCTCAGGTTGTGATTGAATCGAACCTGGACTGTTATGATGTCCTGGTTCAGCAGGA 1508 |||||||||||||||| |||||||||| || | | || ||||| |||| | | | Sbjct 13415 CCTTCCTCAGGTTGTGGTTGAATCGAATTTGTATTTCGATTATGTC--GGTT--GTCGAA 13470 Query 1509 ATGGTCGTTGT----TGGTGCCTGGTGATTGTGAAATACAGGGGATTGTT--TATTTCCC 1562 | || | | | | ||| || ||| ||||||| || | | | |||||||| Sbjct 13471 TTTGTTGGTCTGAGATTGTGGTTGAGGATCTTGAAATATAGAA-ACAGCTAATATTTCCC 13529 Query 1563 AGGTAT-------------------ACACGCCATTCATTGCTTGAGGAGCAGTGATGACT 1603 | ||| | ||||||||||| ||||| ||||||||||| | Sbjct 13530 AAATATGTGGTTGACGTAAACGACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTAT 13589 Query 1604 TCCCCTGTGCGTAAATCCATGATTGAAGCAGTTGATATGGAGGTAATAT-GAACATCCAC 1662 ||||||||||||| |||||||| | ||| | |||| | ||||| |||||||||| Sbjct 13590 TCCCCTGTGCGTATATCCATGACCAGAACAGCTAATATTTTTG-AATATTGAACATCCAC 13648 Query 1663 AGACAAGATCCACTCTCCTACGCCGGATGGCTCGCTTCTTGACTTG----TCTGTGAGTG 1718 | || || | || || | | ||| || |||||||| | | ||| | || Sbjct 13649 AAGGCAGGTCTAGTCGTCTTCTTCTGATTTGTCTCTTCTTGATATCCGGATATGTAAATG 13708 Query 1719 ACTTTG---------------------------ATTGGAA--------CCTGA--GTAGA 1741 | ||| ||||| | |||| | | | Sbjct 13709 AGGTTGCTTTCCTTGTATAATGTCTATGCATCCATTGGGATAACATTTCCTGCACGAATA 13768 Query 1742 GTGGTTCTGTGAGGGTGATGAAGATTGCATTCTTTAATGCCCAGGCCTTTAGCGCTTCTT 1801 ||||| ||||| |||| ||| |||||| | || | ||| |||| | Sbjct 13769 ATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATAT 13828 Query 1802 GCTTTTCCTCGGCTAGGAACTCTTTATAGGACGAGGTAGGTCCTGGATTGCAGAGGAAGA 1861 |||||||| | ||||||||||||||| || ||||| || |||||||| | ||||| Sbjct 13829 TTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGA 13888 Query 1862 TAGTGGGAATTCCACCTTTAATTTGAACGGGTTTCCCGTATTT---CGTGTTGGACTGCC 1918 | || || || ||||| || || | || || | |||||||| | || |||| || Sbjct 13889 TTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGA---CC 13945 Query 1919 AGTCCCTCTGGGACCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGGGGATCGACGTCAT 1978 | | || |||| |||||| || || |||||||||||||| || || |||||||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTAT 14005 Query 1979 CAATGACGTTGTACCAGGCAGCATTATTGAAGACCTTT--GGACTAAGGTCCAGGTGTCC 2036 |||||| ||| ||||||||| || ||||| | ||| | | | || | || || Sbjct 14006 CAATGATGTTATACCAGGCATTAT--TTGAATAAATTTTATTATTCAAATCTAAATGACC 14063 Query 2037 ACACAGGTAATTATGTGGGCCTAAAGATCTGGCCCATATCGTCTTCCCTGTTCTGCTATC 2096 || |||||||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct 14064 GCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTC 14123 Query 2097 ACCTTCTATGACAATACTATTAGGTC-TCCATGGCCGCGCAGCGGAATCCCTAACATTAT 2155 ||| || ||||||||||| || |||| | ||||||||||||||| |||||||||||| | Sbjct 14124 ACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTT 14183 Query 2156 CAGCGACCCATTCTTCAATTTCAACAGGAACTTGGTCAAAGGAAGAACATGGGAAGGGAG 2215 |||| |||| |||||| || ||||||||||| || ||| Sbjct 14184 CAGCTGCCCAGCACTCAATT--------------GTTGAAGGAAGAACAACTAAAAGGAC 14229 Query 2216 AAACATAAGGAGCTGGTGGCTCTTGGAAAATCCTATCTAAATTACTATTTAGATTATGAA 2275 ||||||||| | || || ||| || | |||||| || | || ||||||| Sbjct 14230 TAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGAT 14289 Query 2276 ACTGAAGTACAAAGTCCTTTGGGACTAATTCCCTAATGACATTAAGAGCTTC-TGACTTA 2334 | |||| || ||| | ||| | | ||| ||||| | | ||| ||||| | | || Sbjct 14290 ATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTG 14349 Query 2335 CTGCCGCTGTTAAGCGCTTTGGCGTAAGCATCATTCGCTGATTGTTGACCGCCTCTAGCA 2394 || || |||| ||||| || | ||||||| | || ||| ||| ||||||||| Sbjct 14350 ATGTAGCACTTAA-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCA 14408 Query 2395 GATCGTCCATCGATTTGAAATTGTCCCCATTCGACGGTGTCGCCGTCCTTATCCAGATAG 2454 |||||||||||||||||||| | ||||| ||| | || | ||| || | | || Sbjct 14409 GATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTAT 14468 Query 2455 GACTTGACATCCGAGCTTGATTTGGCACCTTGAATGTTGGGGTGGAAACTGGTGCTACAG 2514 ||| ||||| || |||||| || ||| | ||| |||||| | |||||||| Sbjct 14469 TTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTA 14528 Query 2515 CTTGGGTGTACACAATCGAAGAGACGATTG-TTCGTAATCGTGATTTTACCCTCGAATTG 2573 | || || | ||||||| | | | | ||| ||| ||| || || |||||||| Sbjct 14529 TTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTG-CCTTGCCTTCGAATTG 14587 Query 2574 AATGAGGGCATGCAAGTGAGGTTCCCCATTCTGATG 2609 ||| |||||||| ||| |||||||| ||| || Sbjct 14588 AATAAGGGCATGGCTATGAAATTCCCCATCCTGGTG 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8777546837080