Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001828.1 Length=2597 Score E Sequences producing significant alignments: (Bits) Value seq19028 183 5e-43 >seq19028 Length=31091 Score = 183 bits (202), Expect = 5e-43 Identities = 243/334 (73%), Gaps = 9/334 (3%) Strand=Plus/Plus Query 1519 GAGGAAGTCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCACGATTGCTGGGATTCC 1578 |||||| ||||||||||||| | |||||||||||| | | ||||| || || || Sbjct 13842 GAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCC 13901 Query 1579 GCCTTTAATTTGAACTGGCTTACCGTACTTGCAGTTTGATTG-CCAATCTCTCTGGGCCC 1637 || || || | || ||| | ||||| || | ||| | | ||||| || ||||||| Sbjct 13902 ACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGCCC 13960 Query 1638 CCAGCAATTCTTTCCAGTGCTTTAGCTTTAGATAATGCGGTGCGATGTCATCAATGACGT 1697 ||| || ||||| ||||||| |||||||||||| ||| || |||||||| || Sbjct 13961 CCATAAACTCTTTAAAGTGCTT------TAGATAATGCGGATCGACGTTATCAATGATGT 14014 Query 1698 TATACTGCACGTCGTTTGAATAGACCCTGGTATTGAAGTCCAAATGTCCACTCAGATAAT 1757 ||||| | | |||||||| | | |||| || || ||||| || | || |||| Sbjct 14015 TATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAAT 14074 Query 1758 TATGTGGGCCTAACGCACGCGCCCACATCGTCTTCCCTGTCCTTGAATCACCTTCTATGA 1817 ||||||| ||||| | | |||||| ||||||||||| || || ||||| || |||| Sbjct 14075 TATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGA 14134 Query 1818 CAATACTCATGGGTC-TATTTGGCCGCGCAGCGG 1850 |||||||| |||||| | |||||||||||||| Sbjct 14135 CAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8198648239034