Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001931.1 Length=2615 Score E Sequences producing significant alignments: (Bits) Value seq19028 150 3e-33 >seq19028 Length=31091 Score = 150 bits (166), Expect = 3e-33 Identities = 246/349 (70%), Gaps = 14/349 (4%) Strand=Plus/Plus Query 1654 TTTTCCTCTTTGTTTAGGAAATCTTTATAGCTGGCACCCTCACCAGGATTGCATAGCACG 1713 |||||||| | | ||||| ||||||||||||| | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1714 ATTGATGGGATCCCTCCTTTAATTTGAACAGGCTTGCCGTACTTGCAATTTGACTG--CC 1771 |||| || ||||| || || || | |||||| | ||||| || | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTA-TTTTACCTTG-CTGGACC 13945 Query 1772 AATTCTTTTGGGCCCCAATCAATTCCTTCCAGTGCTTTAACTTTAGATAATGCGGTGCGA 1831 |||| |||||||||| || || || || |||| ||||||||||||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGA 13999 Query 1832 CGTCATCAATGACGTTATACTCCACTTCGTCTGTGAACACTTTGGAATTGAAGTCTAGGT 1891 ||| |||||||| ||||||| | | | || | | ||| ||| || |||| | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1892 GTCCACTTAAATAATTATGTGGGCCTAGTGCTCGAGCCCACATCGTCTTCCCTGTTCTCG 1951 | || | || ||||||||||| |||| | || |||||| |||||||||||||| | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1952 AATCACCTTCTACTATGAGACTTACTGGTC-TTTCTGGCCGCGCAGCGG 1999 | ||||| || | | | ||| |||| || |||||||||||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Score = 89.7 bits (98), Expect = 8e-15 Identities = 254/381 (67%), Gaps = 26/381 (7%) Strand=Plus/Plus Query 982 GAATCATACGGAGAACGCCTTATTATTGTATATGGCATGTACACATGCCTCTAATTCTGT 1041 || |||||| || || || ||| |||||||| | || ||||| |||||| |||| Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1042 GTATGCAACTCTGAAAATTCGGATCTATTTTTACGAT--TCGATCATGAATTAATAAAGT 1099 ||| ||| ||| || || | |||||||| || | |||| |||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCA--AATTAATAAATA 13194 Query 1100 TTGAATTTTATTGAATGATATTCTATTACAT---GAGTT-----ACATACGATCTGTCTG 1151 |||||||||||| ||||||||| | ||||| ||| | ||| || || | Sbjct 13195 TTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTAC-AT-TGAATA 13252 Query 1152 TTGCGAATCG--AACACCTCTAATGACATTGTTAATGGATATAATTCCTAATTGATCTAA 1209 | | || | ||| ||||||| | ||||||||| |||| |||||| | ||||| Sbjct 13253 ATAC--ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1210 ATACATAATAACTAAATGTTTAAAT-CTATTTAAATAAGTCGACCCAGAAGCTGTCGTCG 1268 | | | || || | ||||||| || || | | || | || | || || Sbjct 13311 AAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACG 13370 Query 1269 ATATCGTCCAGACTTGGAAGTTCAGGAAGGCTTTGTGGAGATGCAACGCTCTCCTCAGGT 1328 | |||| || | |||||| ||||| |||||||| |||| || | ||||||||| Sbjct 13371 A----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGT 13426 Query 1329 TGTGGTTGAACCGTATCTGTA 1349 |||||||||| || || |||| Sbjct 13427 TGTGGTTGAATCGAATTTGTA 13447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8256227508758