Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001983.1 Length=2723 Score E Sequences producing significant alignments: (Bits) Value seq19028 206 5e-50 >seq19028 Length=31091 Score = 206 bits (228), Expect = 5e-50 Identities = 306/431 (71%), Gaps = 6/431 (1%) Strand=Plus/Plus Query 1686 GAAAAGTGGTTCTTTGAGGGTGTAGAATTCCGCATTCTTTGAAGCCCACAATTTGAGTGC 1745 ||| | ||||| | ||| |||||||||||| ||||| | ||| ||| ||| | | Sbjct 13764 GAATAATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTT 13823 Query 1746 TGTATTATCAGCCTCGTCCAAGTACTCTTTATAAGAGGATTTTGGTCCAGGATTGCATAA 1805 |||| | |||| || | | |||||||||| ||| | || ||||||||||| || Sbjct 13824 AATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAA 13883 Query 1806 AAAGATGGTGGGGATACCACCTTTAATATGAGTGGGCTTCCCGTACTTGACGTTAGATTG 1865 ||||| || || || ||||| || || | ||| | ||||| || || || | | | Sbjct 13884 GAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGG 13942 Query 1866 -CCAGTCTCTTTGCGCGCCCATGAATTCTTTGAAATGTTTCAAATAATGGGGATCGACGT 1924 ||| | ||||| || ||||| || ||||| || || || | |||||| |||||||||| Sbjct 13943 ACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGT 14002 Query 1925 CATCAATGACGTTATACCAAGCATCGTTGGAATAGATCTTACTGTTAAGATCCAAGTGGC 1984 |||||||| ||||||||| |||| || ||||| || ||| | || | ||| || || | Sbjct 14003 TATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGAC 14062 Query 1985 CGCAAAGATAATTGTGAGGACCTAACGCACGTGCCCACATTGTTTTACCCGTGCGACTAT 2044 |||| || ||||| || || ||||| | | ||||||| ||| || || || | | | Sbjct 14063 CGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACT 14122 Query 2045 CGCCTTCAATCACAATGCTAATCGGTCTTT----CCGGCGCAGCGGGATGTCTAACATTT 2100 | || ||||| ||||| || | |||| || | ||||||||| || ||||||||| Sbjct 14123 CACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTT 14182 Query 2101 TCTGAAGCCCA 2111 || | ||||| Sbjct 14183 TCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8601703127102