Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= NC_001983.1
Length=2723
Score E
Sequences producing significant alignments: (Bits) Value
seq19028 206 5e-50
>seq19028
Length=31091
Score = 206 bits (228), Expect = 5e-50
Identities = 306/431 (71%), Gaps = 6/431 (1%)
Strand=Plus/Plus
Query 1686 GAAAAGTGGTTCTTTGAGGGTGTAGAATTCCGCATTCTTTGAAGCCCACAATTTGAGTGC 1745
||| | ||||| | ||| |||||||||||| ||||| | ||| ||| ||| | |
Sbjct 13764 GAATAATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTT 13823
Query 1746 TGTATTATCAGCCTCGTCCAAGTACTCTTTATAAGAGGATTTTGGTCCAGGATTGCATAA 1805
|||| | |||| || | | |||||||||| ||| | || ||||||||||| ||
Sbjct 13824 AATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAA 13883
Query 1806 AAAGATGGTGGGGATACCACCTTTAATATGAGTGGGCTTCCCGTACTTGACGTTAGATTG 1865
||||| || || || ||||| || || | ||| | ||||| || || || | | |
Sbjct 13884 GAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGG 13942
Query 1866 -CCAGTCTCTTTGCGCGCCCATGAATTCTTTGAAATGTTTCAAATAATGGGGATCGACGT 1924
||| | ||||| || ||||| || ||||| || || || | |||||| ||||||||||
Sbjct 13943 ACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGT 14002
Query 1925 CATCAATGACGTTATACCAAGCATCGTTGGAATAGATCTTACTGTTAAGATCCAAGTGGC 1984
|||||||| ||||||||| |||| || ||||| || ||| | || | ||| || || |
Sbjct 14003 TATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGAC 14062
Query 1985 CGCAAAGATAATTGTGAGGACCTAACGCACGTGCCCACATTGTTTTACCCGTGCGACTAT 2044
|||| || ||||| || || ||||| | | ||||||| ||| || || || | | |
Sbjct 14063 CGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACT 14122
Query 2045 CGCCTTCAATCACAATGCTAATCGGTCTTT----CCGGCGCAGCGGGATGTCTAACATTT 2100
| || ||||| ||||| || | |||| || | ||||||||| || |||||||||
Sbjct 14123 CACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTT 14182
Query 2101 TCTGAAGCCCA 2111
|| | |||||
Sbjct 14183 TCAGCTGCCCA 14193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8601703127102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |