Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_002046.1 Length=2642 Score E Sequences producing significant alignments: (Bits) Value seq19028 181 2e-42 >seq19028 Length=31091 Score = 181 bits (200), Expect = 2e-42 Identities = 486/727 (67%), Gaps = 37/727 (5%) Strand=Plus/Plus Query 1673 TATTTTCCTCCTTGTCTAGGAACTCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCA 1732 |||||| |||| || ||||||||||||||||||| | |||||||||||| | | Sbjct 13826 TATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGA 13885 Query 1733 CGATTGCTGGGATTCCACCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGACTG-- 1790 ||||| || || ||||| || || | || ||| | |||||||| | ||| ||| Sbjct 13886 AGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGA 13943 Query 1791 CCAATCTTTTTGGGCCCCCAGCAATTCTTTCCAGTGCTTTAGCTTTAGATATTGCGGTGC 1850 ||||| |||||||||||| || ||||| |||||||||| ||| ||||| | Sbjct 13944 CCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATC 13997 Query 1851 GACGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCGACCATTGAAGTCCAG 1910 ||||| |||||||| ||||||| | | || ||||| | | | ||| || || | Sbjct 13998 GACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAA 14057 Query 1911 GTGTCCACTGAGGTAATTATGTGGGCCTAACGCACGTGCCCACATCGTCTTCCCTGTTCT 1970 || || | |||||||||||||| ||||| | | ||||||| |||||||||||||| Sbjct 14058 ATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCT 14117 Query 1971 TGAATCACCTTCTACTATGAGACTTAATGGTC-TGTCTGGCCGCGCAGCGGAACCCGAAC 2029 || ||||| || | | | ||| |||| | |||||||||||||| | || | Sbjct 14118 AGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCC---C 14174 Query 2030 CAAAAAATTCATCCGCCCATTCTTGCATCTCGTCGGGAACGTTAGTGAAAGAGGAGAGTT 2089 || | |||| | ||||| ||| ||| || || |||| || || Sbjct 14175 TAACATTTTCAGCTGCCCA-----GCA-CTC------AA--TTGTTGAAGGAAGAACAAC 14220 Query 2090 GAAATGGAGGAACCCACGGTTCCGGAGCCTTGGC--GAATATCCTCTCTAA-GTTGGAGC 2146 ||| ||| ||| | ||||| |||| ||| |||||| | ||||| ||||| | Sbjct 14221 TAAAAGGACTAACATAAGGTTCAGGAG--GGGGCATGAATATTCGATCTAATTTTGGAAC 14278 Query 2147 GGATGTTATGATTCTGCAAGACAAAATCTTTTGGCTGTTCTTCCCTTAAAACCGCTAAGG 2206 || ||||||| || || | ||| | | |||| || ||| || | || | | | Sbjct 14279 -TATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCG 14337 Query 2207 CAGATTGAACAGAATCTGCATTTAACGCCTTTGCATATGAATCATTAGCAGTCTGCTGGC 2266 | || || || ||| ||||||| | |||| || |||||| | || || | Sbjct 14338 CTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAAC 14397 Query 2267 CTCCTCTAGCTGATCTGCCGTCGATCTGGAACTCTCCCCATTCCACTGT-ATCACCGTCC 2325 |||||||||| |||| || ||||| || || | ||||| | | ||| ||||| ||| Sbjct 14398 CTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGT-CGGTGTAATCACAGTCT 14456 Query 2326 TTGTCGATGTAAGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTTGGATGGAAA 2385 || ||||||| ||| || || || |||||||| || | |||||| ||| | Sbjct 14457 TTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TA 14515 Query 2386 TGTGCTG 2392 |||| || Sbjct 14516 TGTGGTG 14522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8342596413344