Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_002510.1 Length=2764 Score E Sequences producing significant alignments: (Bits) Value seq19028 197 2e-47 >seq19028 Length=31091 Score = 197 bits (218), Expect = 2e-47 Identities = 538/816 (66%), Gaps = 27/816 (3%) Strand=Plus/Plus Query 1675 TTCTTGTCCTCGTCTAAATACTCTTTATAAGAGGAATTGGGACCTGGATTGCAGAGGAAG 1734 || || ||||| || | |||||||||| |||| | ||||| |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1735 ATTGTTGGGATGCCCCCTTTAATTTGAACTGGTTTCCCGTATTTTGTGTTGCTTTGCCAG 1794 ||||| || || || || || || | || || | ||||||||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1795 TCCTTTTGTGCCCCCATGAACTCCTTAAAGTGTTTCAGATAATGCGGGTCAACATCATCT 1854 | |||| |||||||| ||||| |||||||| || ||||||||||| || || | ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1855 ATGACGTTATACCATGCGTCATTACTGAACACCTTT--GGGCTCAGATCAAGATGACCGC 1912 |||| ||||||||| || | ||| |||| | ||| ||| ||| | |||||||| Sbjct 14008 ATGATGTTATACCAGGCATTATT--TGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1913 ACAGATAATTGTGAGGCCCAAGACTTCTGGCCCATACGGTCTTTCCTGTTCTGCTTTCCC 1972 | || ||||| || || || | | ||| ||||| | ||||| |||||||| || | Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1973 CTTCAATCACTATACTAATCGGTC-TACTTGGCCGCGCAGCGGCCTCAACGACGTTCTCC 2031 | ||||| || ||||| | |||| | ||||||||||||||| || || || || Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCA 14185 Query 2032 GCCGCCCATTCTTCAAGTTCTTCTGGAACTTGGTCGAACGAAGAAGACAAAAAAGGAGAA 2091 || ||||| |||| | || ||| |||||| | ||||||| | Sbjct 14186 GCTGCCCAGCACTCAA--------------TTGTTGAAGGAAGAACAACTAAAAGGACTA 14231 Query 2092 ACATAAGGAGCTGGAGGCTCCTGAAAAATCCTCTCTAAATTACTATTTAAATTATGAAAT 2151 |||||||| | ||||| | || || | ||||| || | || ||||||| || Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 2152 TGTAAAACAAAATCTTTG--GGAGCTAACTCCCTTATAACCCTAAGAGCCTCTGCCTTAC 2209 || ||| | || ||||| || | || || |||| ||| || ||| | | Sbjct 14292 TG--AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTG 14349 Query 2210 TTCCTGCGTTAAGCGCTGCGGCGTAAGCGTCATTGGCGGTCTGTTGTCCTCCTCTTGCAG 2269 | || | | |||| | || | | ||||| | || ||| |||||||| |||| Sbjct 14350 ATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAG 14409 Query 2270 ATCTTCCGTCGATCTGGAATTCTCCCCATTCCAGTGT-GTCTCCATCCTTGTCGATGTAG 2328 ||| ||| ||||| || || | ||||| | | |||| || | || || ||||||| Sbjct 14410 ATCGTCCATCGATTTGAAAATTGCCCCAGT-CGGTGTAATCACAGTCTTTCGCGATGTAT 14468 Query 2329 GACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTG-ACCT 2387 ||| || || || |||||||| || | |||||| ||| ||||| || | Sbjct 14469 TTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTGCTAGT 14527 Query 2388 ATTTGGGGAGACCAGGTCGAAGAGTCTCTGATTTTGGCACTTGAACTTCCCTTCGAACTG 2447 ||| || || | |||||| |||| | ||| | | ||| |||||||| || Sbjct 14528 ATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTG 14587 Query 2448 GAGAAGCACATGTAGATGAGGTTGGCCATCCTCGTG 2483 | ||| |||| |||| || ||||||| ||| Sbjct 14588 AATAAGGGCATGGCTATGAAATTCCCCATCCTGGTG 14623 Score = 127 bits (140), Expect = 4e-26 Identities = 258/376 (69%), Gaps = 13/376 (3%) Strand=Plus/Plus Query 992 CATACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTAT 1051 |||||||| ||||| |||| ||||||| | |||||||| ||||||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1052 GCTACGTTAAAGATACGGATCTACTTCTACGATTCGGTATCTAATTAATACA-ATTTTAT 1110 ||| | | | ||| | || || || || ||||| |||||||| | ||| || Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1111 TTGAATATTGTGAGTGA-ATTCACTT---GCCACTGTTGTTTGCAATACATCGTACAAAA 1166 || |||| | | ||| ||||| | |||||||| | | ||||| | | || | Sbjct 13201 TT---TATT-TCA-TGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1167 CATGATTGACTGCCCTAATTATATTGTTAATTGAAATTACGCCTATTCTATACAAATATT 1226 ||| | || || ||||| ||||||||||| ||| || |||| || | ||| ||| Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1227 TCATAATCTGCTTCCTAAATACGTTTAAGAAAAGACCAGTCGGAGGGCGTGAGATCGTCC 1286 |||| | | ||||||| ||||||||| |||||||| ||| | |||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1287 AGACCCTGAAGTTCATGAAACATTTGTGAATCCCCAATTCCTTCCTGAGGTTGTAGTTGA 1346 || | ||||||| | |||| |||||||| || ||||||||| ||||||| ||||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1347 ATCTTATCTGCATCTC 1362 ||| || || || || Sbjct 13436 ATCGAATTTGTATTTC 13451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8732855908140