Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_002555.1 Length=2622 Score E Sequences producing significant alignments: (Bits) Value seq19028 167 4e-38 >seq19028 Length=31091 Score = 167 bits (184), Expect = 4e-38 Identities = 453/684 (66%), Gaps = 36/684 (5%) Strand=Plus/Plus Query 1670 TCGAGGAAACATTTATAGCTGGCCCCCTCGCCAGGATTGCAAAGCACGATGCATGGGATA 1729 |||||||| ||||||||||| ||||||||||| | | ||| || || Sbjct 13840 TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATC 13899 Query 1730 CCACCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTTGATTG-CCAATCCCTTTGGGC 1788 ||||| || || | || ||| |||||||||| | ||| | | ||||| |||||||| Sbjct 13900 CCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGC 13958 Query 1789 CCCAATCAATTCTTTCCAGTGCTTTAACTTTAGATAGTGCGGTGCGATGTCATCGATGAC 1848 ||| || || ||||| ||||||||| |||| ||||| ||| || ||| |||| Sbjct 13959 CCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCGACGTTATCAATGAT 14012 Query 1849 GTTATATTCAACATGATTTGAATAAACCCTAGGATTGAAATCGAGGTGACCACTCAAATA 1908 |||||| ||| ||||||||||| || ||| ||||| | ||||| | | || Sbjct 14013 GTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTA 14072 Query 1909 ATTATGGGCCCCTAATGCACGTGCCCACATCGTCTTTCCCGTTCGAGAATCACCTTCAAT 1968 |||||| | ||||| | | ||||||| ||||| || |||| ||| ||||| ||||| Sbjct 14073 ATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAAT 14132 Query 1969 GATGATACTAATAGGTCGTT-CCGGCCGCGCAGCGGCACCTCTCCCAAAATAGTCATCTG 2027 || ||||| | ||||||| ||||||||||||||| | || || || ||| ||| Sbjct 14133 GACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC---CCTAACATTTTCAGCTG 14189 Query 2028 CCCAATCTTGCATCTCTCTCGGTACGTTAGTGAAAGAGGAGAGGGGAAACGTAGGGGCCC 2087 |||| ||| ||| || |||| || || ||| | | | Sbjct 14190 CCCA-----GCA-CTC--------AATTGTTGAAGGAAGAACAACTAAAAGGACTAACAT 14235 Query 2088 ATGGCTCCGGA--GCCCTTGCAAATATCCTATCTAAATTACTATTTAGATTGTGAAACTG 2145 | || || ||| | | || ||||| | |||||| || | || ||| ||| | || Sbjct 14236 AAGGTTCAGGAGGGGGCATG--AATATTCGATCTAATTTTGGAACTATATTATGATATTG 14293 Query 2146 AAATAAGAACTTTTCCGGCATCTTCTCCCGGATTATCTGCAAGGCGATGTCTT---TGGA 2202 ||||| |||||| | ||||| || || | || | | || ||| | |||| | || Sbjct 14294 AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAA--TAGAAAGCGCT-TCTTCAATTGA 14350 Query 2203 AGGTGCGTTCAAGGCTTCTGCGGCAGCGTCGTTAGCTGTCTGGCAACCGCCTCTAGCACT 2262 | || | || |||||||| | | || || | ||| || |||| ||||||||| Sbjct 14351 TGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGA 14410 Query 2263 TCTGCCGTCGATTTGGAATTCCCCCCATTCGATAGTATCTCCGTCCTTGTCGACATAGGA 2322 || || |||||||| || | ||||| ||| | ||| | ||| || ||| || Sbjct 14411 TCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTT 14470 Query 2323 CTTGACGTCGGACGATGATTTAGC 2346 ||| || || || ||||||||||| Sbjct 14471 CTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8278619446984